| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1266 |
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| Symbol | |
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| ID | 5109082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1426798 |
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| End bp | 1427634 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502491 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001186763 |
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| Protein GI | 146306298 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.343225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCC TAAGCGGAAA AACCGCCGTG ATCACCGGCG CGGCCTCGGG TATCGGCCAG
GCACTTGCCG TTCGCCTGGC GGCCGAAGGC TGCCAACTGG CCCTGGCCGA CATCGACCTG
CCACAGCTGG AACGCAATGC CGAAGCGCTG CGCCACCAGA GCCCGCGCGT CACCTGCCAT
GCCCTGGACG TGGCCCAGCG CGACGCGGTG CATGCCTTCG CTGAGCAGGT GATAAGCGAA
CACGGCGGCG CCGATCTGAT CATCAACAAC GCCGGCGTGG CCGTATCGCA GACCATCGAT
CAGCTCAGCT ACGAGGATTT CGAATGGCTG ATGAACATCA ACTTCTGGGG CGTGGTGCAT
GGCAGCAAGG CCTTTCTGCC GCACCTGCTG CGCCAGGGCA GCGGGCATAT CGTCAACCTG
TCGAGCATCT TCGGCATCGT CAGCCTGCCG AGCCAGGGCG CCTATAACGC CAGCAAGTTT
GCCGTGCGCG GCTTCACCGA GGCCCTGCGC CAGGAGGTCG CCTGCCGCGG CGTGGCGGTC
AGTTGCGTCC ATCCCGGCGG AATCAAGACC AATATCGCCC GCTCCGCACG CTTCTATCGC
GGCATAGATG GCTCTCAGGA CGCCGAGCGC GCCTGCCAGA ATTTCGACAA GCTGGCGCGA
ACCACCGCGG CCCAGGCAGC CGAGGTCATC GTCAATGGCA TCAAGAGCGG CAAACCGCGC
ATCCTGGTGG GCAGCGATGC GCGCCTGCTC GACCAGATTC AGCGACTGCT ACCGGCGTCC
TATCCCGGAT TGCTGGCCAG ACTGCTGGGC AGAAAGGGAA CCGCAAGCCA TCAATAG
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| Protein sequence | MPSLSGKTAV ITGAASGIGQ ALAVRLAAEG CQLALADIDL PQLERNAEAL RHQSPRVTCH
ALDVAQRDAV HAFAEQVISE HGGADLIINN AGVAVSQTID QLSYEDFEWL MNINFWGVVH
GSKAFLPHLL RQGSGHIVNL SSIFGIVSLP SQGAYNASKF AVRGFTEALR QEVACRGVAV
SCVHPGGIKT NIARSARFYR GIDGSQDAER ACQNFDKLAR TTAAQAAEVI VNGIKSGKPR
ILVGSDARLL DQIQRLLPAS YPGLLARLLG RKGTASHQ
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