| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6766 |
|---|
| Symbol | |
|---|
| ID | 5154307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7047804 |
|---|
| End bp | 7048643 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640561449 |
|---|
| Product | putative short-chain dehydrogenase |
|---|
| Protein accession | YP_001242562 |
|---|
| Protein GI | 148257977 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.353478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAA TCAGCGGCGC GGCGGCGGCC GTGACGGGAG CATCCAGCGG CATCGGCCGC
GCCTTGGCAC AGGAACTCGC GGCGCGCGGC TGCGATCTCG CTCTGGCCGA TCGCGATGAG
GCGGGCCTGG CCAGCGTTGC AAGCGAGCTC GCCACGACAG GCCGCAAGGT CACCACGCAT
CGCCTCGATG TCAGTGACGG CCAGGCGATC GGCCAGTTCG CCGAGGATGC GACGCGCGCG
CATCCCAGCC TCAACATCGT CATCAACAAT GCCGGCGTCG CGCTGTTCGG CGGTTTCAAC
GAGATCGACC AGGCCGAGAT GGAGTGGCTG TTCAACATCA ATTTCTGGGG CGTCGTGCAC
GGCACCCGGG CCTTCCTGCC GCATCTTGCG CGGCAGCGCG CGGCGCACAT CGTCAATCTG
TCCTCGATCT TCGGCATCAT CGCCCCGCCC GGCCAGTCGG CCTATGCGGC AGCCAAATTC
GCGGTGCGCG GTTTCTCCGA GAGCCTGCGT CATGAGCTTG CCACCGCCAA CAGCCCAATC
AGGCTGTCGG TCGTGCATCC CGGCGGCGTC GCCACCGCGA TCGCGCGCAA TGCCCGCGCC
GGCCACGGCA TGACCGACAA TGCGCGCCGC GTGCAGGCGA TCGAGCGCTT CGAGCGGCTG
GCCAGGACCA CCCCGCGCGA GGCGGCCCAG CGCATCATCC AGGGCATCGA ACGCAACGAG
CCGCGCATCC TGATCGGCGG CGACGCGCGA ATCATGGATC TGCTGCAGCG GTTCATGCCG
GGCACCTATT GGAAGGTGAT GGCCAAGCGC CTGGAGAAGG CGGCCGCGAA GCAAGGCTGA
|
|---|
| Protein sequence | MTAISGAAAA VTGASSGIGR ALAQELAARG CDLALADRDE AGLASVASEL ATTGRKVTTH
RLDVSDGQAI GQFAEDATRA HPSLNIVINN AGVALFGGFN EIDQAEMEWL FNINFWGVVH
GTRAFLPHLA RQRAAHIVNL SSIFGIIAPP GQSAYAAAKF AVRGFSESLR HELATANSPI
RLSVVHPGGV ATAIARNARA GHGMTDNARR VQAIERFERL ARTTPREAAQ RIIQGIERNE
PRILIGGDAR IMDLLQRFMP GTYWKVMAKR LEKAAAKQG
|
|---|
| |