Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0488 |
Symbol | |
ID | 7107433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 539257 |
End bp | 540042 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643478760 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002375821 |
Protein GI | 218437492 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCGA CTGTCTTAAT TACTGGCGCA TCTCAAGGAA TAGGCAAAGC AACCGCCTTA CTTTTAGCTA AAAAAGGCTA TAATCTGGCA CTGGCCGCGC GAAACTCTGA GCGTTTAGAA GCTGTTACTC AAACCATAAA CAATCAAGGG GGAAAAGCCA TTGCAATTCC CACCGATGTG ACTCATGCTC AACAGGTTGA AAGTTTAGTT AAAAAAGCCT TAGATCACTA TAAACAGATC GATATTCTCA TCAATAATGC AGGAATTTGT ATGACTGCAC CGATGGAAGA AAGCACCTTA GAAAATTGGC AACAGGTAAT GAATGTTAAT TTGTGGGGTT ATGTTTATAC TATTCAAGCC TTATTACCTC ATTTCCTCGC CCAAAAACGA GGCATCATTA TTAATGTTGG CTCAATTGGG GGAAAAATTC CCCTTCCGAA TATGACCGCT TATTGTACTA GCAAATATGC GGTAACTGGA TTAACTGAAA CCCTTCGCTT AGAATTAGAA CCGAAAGGAA TACAAGTCTG TTGTGTTCAT CCCAGTGTTA CTAATAGTGA TTTTCTAGAG CGGGCAATTT TTAATTCCGA TACTCGAAAA AAACAGATGG AAGAAACCTT AAAAACTGCG ATCGCTAGTC AGCCGGAAGA TGTGGCTAAA ACAATTGTAG AGGTAATAGA ACATCCTAAA CCAGAGGTAA TGGTTGGGTC TGGAGTAATG TTAAATACTA TTTATAATTT TGTTCCTAGA TTATATGATT GGGTCGTGAA ACAATCTAGT CAATAA
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Protein sequence | MNSTVLITGA SQGIGKATAL LLAKKGYNLA LAARNSERLE AVTQTINNQG GKAIAIPTDV THAQQVESLV KKALDHYKQI DILINNAGIC MTAPMEESTL ENWQQVMNVN LWGYVYTIQA LLPHFLAQKR GIIINVGSIG GKIPLPNMTA YCTSKYAVTG LTETLRLELE PKGIQVCCVH PSVTNSDFLE RAIFNSDTRK KQMEETLKTA IASQPEDVAK TIVEVIEHPK PEVMVGSGVM LNTIYNFVPR LYDWVVKQSS Q
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