| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12242 |
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| Symbol | |
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| ID | 5222918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 2492069 |
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| End bp | 2493847 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640606998 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001288175 |
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| Protein GI | 148823421 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 240 |
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| Plasmid unclonability p-value | 0.0208017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 192 |
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| Fosmid unclonability p-value | 0.29752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCAA CACAACAGAT GTCCCGTCTG GTCGACAGCC CGGATGGCGT TCGCATCGCG
GTCTACCACG AAGGCAATCC CGACGGCCCG ACCGTCGTGC TGGTGCATGG CTTTCCGGAC
TCGCACGTGC TGTGGGACGG TGTCGTTCCG CTGCTGGCCG AACGGTTCCG GATCGTTCGC
TACGACAACC GTGGTGTCGG TCGCTCATCG GTGCCCAAAC CCATTTCGGC CTACACCATG
GCCCATTTCG CCGACGATTT CGACGCCGTC ATCGGCGAGC TGAGCCCCGG TGAGCCGGTG
CACGTGCTGG CCCATGACTG GGGTTCGGTG GGGGTGTGGG AGTACCTGCG CCGGCCCGGA
GCCAGTGATC GGGTCGCCTC GTTCACGTCG GTGTCCGGCC CCAGTCAAGA CCACCTGGTC
AACTACGTTT ATGGCGGTCT GCGGCGGCCT TGGCGTCCGC GAACCTTTCT ACGGGCGATC
AGCCAGACAC TGCGGTTGAG CTACATGGCC TTGTTCTCGG TACCGGTGGT CGCACCGCTG
CTGCTTCGGG TTGCGCTGTC GAGTGCGGCC GTCCGCCGCA ACATGGTCGG CGACATTCCC
GTCGACCAGA TTCATCACTC GGAGACGCTG GCCCGTGATG CCGCCCACTC GGTCAAGACT
TACCCCGCAA ACTACTTTCG GTCGTTTTCC AGCAGCCGCC GCGGCCGGGC CATTCCGATA
GTTGATGTGC CGGTGCAGCT GATCGTCAAT TCCCAGGACC CCTACGTGCG GCCCTACGGA
TACGACCAGA CGGCGCGCTG GGTGCCGCGG CTCTGGCGGC GTGACATCAA AGCTGGTCAC
TTTTCGCCGA TGTCGCACCC GCAGGTGATG GCGGCCGCCG TGCACGACTT CGCCGACCTG
GCCGACGGCA AGCAGCCGAG CCGCGCGCTG TTACGCGCCC AGGTCGGACG GCCCCGCGGG
TACTTCGGTG ACACGCTGGT GTCGGTTACC GGGGCGGGCA GCGGAATCGG CCGCGAGACC
GCGCTCGCCT TTGCTCGTGA GGGTGCAGAG ATCGTTATCA GCGACATCGA CGAGGCCACC
GTCAAGGACA CCGCCGCCGA GATCGCCGCA CGTGGTGGCA TCGCGTACCC CTATGTGCTC
GACGTGTCCG ACGCCGAGGC GGTCGAGGCA TTCGCCGAGC GGGTCAGCGC CGAACACGGG
GTCCCCGACA TTGTCGTCAA CAACGCCGGC ATCGGCCAGG CGGGTCGGTT CCTGGACACC
CCGGCTGAGC AGTTCGACCG GGTGCTGGCC GTCAACCTGG GCGGCGTGGT GAACGGTTGC
CGCGCTTTTG GGCAGCGTCT GGTCGAGCGG GGGACTGGCG GGCACATCGT CAACGTGTCG
TCGATGGCCG CCTATGCGCC GCTGCAGTCG CTCAGCGCGT ACTGCACCTC CAAAGCGGCG
ACCTACATGT TCTCCGACTG TTTGCGGGCC GAACTCGATG CCGCCGGTGT CGGACTGACC
ACCATCTGCC CCGGTGTCAT TGACACCAAC ATCGTCGCTA CCACCGGTTT CCACGCGCCC
GGAACCGACG AGGAGAAGAT CGACGGCCGG CGGGGGCAGA TCGACAAGAT GTTTGCGCTG
CGCAGCTACG GGCCGGACAA GGTAGCCGAC GCGATCGTGT CCGCGGTCAA GAAGAAGAAG
CCGATCAGAC CGGTCGCGCC GGAAGCCTAT GCGCTATACG GCATCTCCCG GGTGCTGCCG
CAGGCGCTGC GCAGTACCGC GCGGCTGCGG GTGATCTAA
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| Protein sequence | MPATQQMSRL VDSPDGVRIA VYHEGNPDGP TVVLVHGFPD SHVLWDGVVP LLAERFRIVR
YDNRGVGRSS VPKPISAYTM AHFADDFDAV IGELSPGEPV HVLAHDWGSV GVWEYLRRPG
ASDRVASFTS VSGPSQDHLV NYVYGGLRRP WRPRTFLRAI SQTLRLSYMA LFSVPVVAPL
LLRVALSSAA VRRNMVGDIP VDQIHHSETL ARDAAHSVKT YPANYFRSFS SSRRGRAIPI
VDVPVQLIVN SQDPYVRPYG YDQTARWVPR LWRRDIKAGH FSPMSHPQVM AAAVHDFADL
ADGKQPSRAL LRAQVGRPRG YFGDTLVSVT GAGSGIGRET ALAFAREGAE IVISDIDEAT
VKDTAAEIAA RGGIAYPYVL DVSDAEAVEA FAERVSAEHG VPDIVVNNAG IGQAGRFLDT
PAEQFDRVLA VNLGGVVNGC RAFGQRLVER GTGGHIVNVS SMAAYAPLQS LSAYCTSKAA
TYMFSDCLRA ELDAAGVGLT TICPGVIDTN IVATTGFHAP GTDEEKIDGR RGQIDKMFAL
RSYGPDKVAD AIVSAVKKKK PIRPVAPEAY ALYGISRVLP QALRSTARLR VI
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