More than 300 homologs were found in PanDaTox collection
for query gene Ksed_03130 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_03130  short-chain dehydrogenase of unknown substrate specificity  100 
 
 
275 aa  551  1e-156  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0145  short-chain dehydrogenase/reductase SDR  57.72 
 
 
267 aa  299  3e-80  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0175  short-chain dehydrogenase/reductase SDR  50.79 
 
 
267 aa  248  6e-65  Meiothermus ruber DSM 1279  Bacteria  normal  0.319176  normal 
 
 
-
 
NC_011831  Cagg_3168  short-chain dehydrogenase/reductase SDR  51.94 
 
 
269 aa  241  1e-62  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.685444  normal 
 
 
-
 
NC_009664  Krad_2525  short-chain dehydrogenase/reductase SDR  46.32 
 
 
276 aa  236  4e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0303  short-chain dehydrogenase/reductase SDR  44.49 
 
 
262 aa  214  1.9999999999999998e-54  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0313  short-chain dehydrogenase/reductase SDR  44.49 
 
 
262 aa  214  1.9999999999999998e-54  Mycobacterium sp. KMS  Bacteria  normal  normal  0.19239 
 
 
-
 
NC_009077  Mjls_0294  short-chain dehydrogenase/reductase SDR  44.49 
 
 
262 aa  213  2.9999999999999995e-54  Mycobacterium sp. JLS  Bacteria  normal  0.948025  normal 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  40.47 
 
 
279 aa  173  1.9999999999999998e-42  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  37.92 
 
 
281 aa  163  2.0000000000000002e-39  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  37.98 
 
 
278 aa  156  4e-37  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  36.5 
 
 
295 aa  150  2e-35  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  37.19 
 
 
300 aa  150  2e-35  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  39.37 
 
 
276 aa  150  2e-35  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  36.84 
 
 
300 aa  150  3e-35  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  36.84 
 
 
300 aa  150  3e-35  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  35.77 
 
 
312 aa  149  6e-35  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  38.93 
 
 
296 aa  148  8e-35  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  36.49 
 
 
300 aa  148  9e-35  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  38.02 
 
 
300 aa  148  1.0000000000000001e-34  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  40.08 
 
 
276 aa  147  2.0000000000000003e-34  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  34.75 
 
 
312 aa  147  2.0000000000000003e-34  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  38.1 
 
 
276 aa  147  3e-34  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  38.1 
 
 
276 aa  147  3e-34  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  38.1 
 
 
276 aa  147  3e-34  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  36.57 
 
 
276 aa  146  4.0000000000000006e-34  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_009338  Mflv_2216  short-chain dehydrogenase/reductase SDR  38.74 
 
 
276 aa  145  6e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.742045 
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  36.88 
 
 
296 aa  145  1e-33  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  35.77 
 
 
311 aa  145  1e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  35.5 
 
 
302 aa  143  2e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  35.5 
 
 
302 aa  143  2e-33  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  35 
 
 
309 aa  144  2e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  35.5 
 
 
302 aa  143  2e-33  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  35 
 
 
309 aa  144  2e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  36.5 
 
 
296 aa  144  2e-33  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  35 
 
 
309 aa  144  2e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  36.88 
 
 
302 aa  143  3e-33  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  35.79 
 
 
271 aa  143  3e-33  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  36.88 
 
 
302 aa  143  3e-33  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  35.61 
 
 
302 aa  143  3e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  35.61 
 
 
302 aa  143  3e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  34.62 
 
 
307 aa  142  4e-33  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_007650  BTH_II0404  short chain dehydrogenase/reductase family oxidoreductase  35.61 
 
 
302 aa  142  7e-33  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  35.42 
 
 
286 aa  140  1.9999999999999998e-32  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  35.4 
 
 
295 aa  140  1.9999999999999998e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  35.91 
 
 
273 aa  140  3e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  34.67 
 
 
295 aa  139  4.999999999999999e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  37.65 
 
 
275 aa  139  4.999999999999999e-32  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  34.6 
 
 
315 aa  139  6e-32  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  35.23 
 
 
279 aa  138  8.999999999999999e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  33.46 
 
 
308 aa  137  1e-31  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  36.16 
 
 
308 aa  138  1e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  33.46 
 
 
308 aa  137  1e-31  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  33.46 
 
 
308 aa  137  1e-31  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  33.46 
 
 
308 aa  137  1e-31  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  33.46 
 
 
308 aa  137  1e-31  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  35.74 
 
 
308 aa  137  2e-31  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  37.89 
 
 
276 aa  135  6.0000000000000005e-31  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  36.82 
 
 
275 aa  134  9.999999999999999e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  36.82 
 
 
271 aa  131  1.0000000000000001e-29  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  37.88 
 
 
273 aa  130  2.0000000000000002e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  34.59 
 
 
280 aa  130  2.0000000000000002e-29  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_010511  M446_3686  short-chain dehydrogenase/reductase SDR  36.26 
 
 
273 aa  127  2.0000000000000002e-28  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00031135 
 
 
-
 
NC_010676  Bphyt_4878  short-chain dehydrogenase/reductase SDR  33.33 
 
 
302 aa  125  7e-28  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00176242  normal  0.778008 
 
 
-
 
NC_009524  PsycPRwf_0304  short-chain dehydrogenase/reductase SDR  34.33 
 
 
309 aa  125  7e-28  Psychrobacter sp. PRwf-1  Bacteria  normal  0.074209  normal  0.817715 
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  33.96 
 
 
282 aa  123  3e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_007952  Bxe_B1790  short chain dehydrogenase  33.96 
 
 
307 aa  123  4e-27  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00000125648 
 
 
-
 
NC_013739  Cwoe_5665  short-chain dehydrogenase/reductase SDR  35.74 
 
 
275 aa  121  9.999999999999999e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4692  short-chain dehydrogenase/reductase SDR  36.76 
 
 
274 aa  119  3.9999999999999996e-26  Methylobacterium populi BJ001  Bacteria  normal  0.169711  normal  0.0760952 
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  32.6 
 
 
281 aa  114  1.0000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_013440  Hoch_5364  short-chain dehydrogenase/reductase SDR  31.44 
 
 
267 aa  113  3e-24  Haliangium ochraceum DSM 14365  Bacteria  normal  0.676071  normal 
 
 
-
 
NC_011757  Mchl_4548  short-chain dehydrogenase/reductase SDR  36.03 
 
 
274 aa  112  5e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.239905  normal  0.858139 
 
 
-
 
NC_014148  Plim_3123  3-oxoacyl-(acyl-carrier-protein) reductase  39.69 
 
 
251 aa  111  1.0000000000000001e-23  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0932491  n/a   
 
 
-
 
NC_009675  Anae109_0032  short-chain dehydrogenase/reductase SDR  34.75 
 
 
342 aa  111  1.0000000000000001e-23  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.891974  normal 
 
 
-
 
NC_009077  Mjls_3322  short chain dehydrogenase  37.93 
 
 
588 aa  110  2.0000000000000002e-23  Mycobacterium sp. JLS  Bacteria  normal  normal  0.178301 
 
 
-
 
NC_007488  RSP_7370  short-chain alcohol dehydrogenase  40.84 
 
 
247 aa  110  2.0000000000000002e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3311  short chain dehydrogenase  37.93 
 
 
588 aa  110  2.0000000000000002e-23  Mycobacterium sp. MCS  Bacteria  normal  0.768628  n/a   
 
 
-
 
NC_008705  Mkms_3373  short chain dehydrogenase  37.93 
 
 
588 aa  110  2.0000000000000002e-23  Mycobacterium sp. KMS  Bacteria  normal  0.855673  normal  0.12205 
 
 
-
 
NC_010172  Mext_4179  short-chain dehydrogenase/reductase SDR  36.03 
 
 
274 aa  110  3e-23  Methylobacterium extorquens PA1  Bacteria  normal  0.719073  normal 
 
 
-
 
NC_009565  TBFG_12242  short chain dehydrogenase  39.6 
 
 
592 aa  110  3e-23  Mycobacterium tuberculosis F11  Bacteria  normal  0.0208017  normal  0.29752 
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  37.5 
 
 
246 aa  108  7.000000000000001e-23  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  34.76 
 
 
267 aa  108  7.000000000000001e-23  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_011738  PCC7424_5709  short-chain dehydrogenase/reductase SDR  30.55 
 
 
347 aa  107  2e-22  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2823  short chain dehydrogenase  30.98 
 
 
292 aa  107  2e-22  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00207351  n/a   
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  37.5 
 
 
246 aa  107  3e-22  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4287  short-chain dehydrogenase/reductase SDR  33.6 
 
 
276 aa  107  3e-22  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0836216  n/a   
 
 
-
 
NC_007958  RPD_2691  short-chain dehydrogenase/reductase SDR  32.67 
 
 
322 aa  105  9e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.16655  normal 
 
 
-
 
NC_009049  Rsph17029_1031  short-chain dehydrogenase/reductase SDR  41.03 
 
 
248 aa  105  1e-21  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.961994  normal  0.547574 
 
 
-
 
NC_009338  Mflv_4313  short chain dehydrogenase  30.4 
 
 
290 aa  105  1e-21  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3619  short-chain dehydrogenase/reductase SDR  37.04 
 
 
289 aa  104  2e-21  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1414  short chain dehydrogenase  32.03 
 
 
270 aa  104  2e-21  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7667  short-chain dehydrogenase/reductase SDR  37.44 
 
 
332 aa  104  2e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.755346  n/a   
 
 
-
 
NC_008726  Mvan_2034  short chain dehydrogenase  29.09 
 
 
290 aa  103  3e-21  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.959562 
 
 
-
 
NC_007493  RSP_2371  3-oxoacyl-(acyl-carrier protein) reductase / Short-chain dehydrogenase/reductase SDR  40.51 
 
 
248 aa  103  3e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2396  short-chain dehydrogenase/reductase SDR  35.6 
 
 
321 aa  103  4e-21  Salinispora tropica CNB-440  Bacteria  normal  0.13478  normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  29.01 
 
 
261 aa  103  4e-21  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011313  VSAL_II0263  putative short chain dehydrogenase  33.5 
 
 
278 aa  103  4e-21  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.390771  n/a   
 
 
-
 
NC_008688  Pden_5052  short-chain dehydrogenase/reductase SDR  34.21 
 
 
246 aa  103  4e-21  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1826  3-ketoacyl-(acyl-carrier-protein) reductase  35.55 
 
 
239 aa  102  5e-21  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3735  short chain dehydrogenase  34.23 
 
 
281 aa  102  5e-21  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
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