| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3796 |
|---|
| Symbol | |
|---|
| ID | 5358821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 3927993 |
|---|
| End bp | 3928880 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640812846 |
|---|
| Product | putative short-chain dehydrogenase |
|---|
| Protein accession | YP_001349150 |
|---|
| Protein GI | 152986896 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.205058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGT TCGAAAACAA AGTCGCCGCC ATTACCGGAG CGGGTTCGGG CATCGGCCGC
GCTCTCGCGG TGGAGCTGGC CCGCCAGGGT TGCCACCTGG CGTTGGCCGA CGTCAACGCC
GCCGGTCTCG AGGAAACCCG CCAGATCCTC GCCAGCAGCG GCGTACGGGT TTCCATCGAC
ATCGTCAACG TGGCCGAGCG CGAGCAGGTG CAGGCCTGGG CCGACAAGGC GGCCGCCGAG
CACGGCCGGG TCAACCTGAT CTTCAACAAC GCCGGGGTCG CCCATGCCGG CACCGTGGAA
GGCAGCGACC ACTCGGAATA CGAGTGGATC ATGAACATCA ACTTCTGGGG CGTGGTGAAC
GGCACCAAGG CCTTCCTGCC GCACCTGAAG GCCTCCGGCA ATGGCCATGT GGTCAACGTT
TCCAGCGTCT TCGGGCTGTT CGCCCAGCCA GGCATGAGCG CCTACAACGC GACCAAGTAC
GCGGTGCGCG GTTTCACCGA GTCGCTGCGG CAGGAGCTGG ACATGGAGGA TTCAGGGGTT
TCCGCCAGTT GCGTGCACCC CGGCGGGATC AAGACCAACA TCGCCAAGAC CGCACGGATG
AACGAAAGCA TGGCCAAGGT AACCGGCCAG ACCCCCGACA AGGCCCGCCA GCAGTTCAAC
GACCAACTGC TGCGGACCAC TCCGGAAAAG GCCGCCCAGG TCATCCTGCG CGGCGTGCAG
CGCGACAGCC GGCGCATCCT GATCGGCGCC GACGCCCATG CGATCGACGT GATGCTGCGC
CTGGCGCCGG TGCTCTACCA GCGTGTGGTC ACCGCCAGCA TGCGCCTGGC CGCGCGTTTC
GCGCCGCACC CGAAGAGCGG CCAGGGCGCC CGCGAAGCCA GCGAATGA
|
|---|
| Protein sequence | MKSFENKVAA ITGAGSGIGR ALAVELARQG CHLALADVNA AGLEETRQIL ASSGVRVSID
IVNVAEREQV QAWADKAAAE HGRVNLIFNN AGVAHAGTVE GSDHSEYEWI MNINFWGVVN
GTKAFLPHLK ASGNGHVVNV SSVFGLFAQP GMSAYNATKY AVRGFTESLR QELDMEDSGV
SASCVHPGGI KTNIAKTARM NESMAKVTGQ TPDKARQQFN DQLLRTTPEK AAQVILRGVQ
RDSRRILIGA DAHAIDVMLR LAPVLYQRVV TASMRLAARF APHPKSGQGA REASE
|
|---|
| |