More than 300 homologs were found in PanDaTox collection
for query gene M446_3686 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_3686  short-chain dehydrogenase/reductase SDR  100 
 
 
273 aa  523  1e-147  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00031135 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  83.15 
 
 
273 aa  430  1e-119  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4692  short-chain dehydrogenase/reductase SDR  65.68 
 
 
274 aa  317  1e-85  Methylobacterium populi BJ001  Bacteria  normal  0.169711  normal  0.0760952 
 
 
-
 
NC_011757  Mchl_4548  short-chain dehydrogenase/reductase SDR  63.84 
 
 
274 aa  300  2e-80  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.239905  normal  0.858139 
 
 
-
 
NC_010172  Mext_4179  short-chain dehydrogenase/reductase SDR  63.84 
 
 
274 aa  298  4e-80  Methylobacterium extorquens PA1  Bacteria  normal  0.719073  normal 
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  61.43 
 
 
281 aa  289  3e-77  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  52.47 
 
 
281 aa  267  1e-70  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  51.1 
 
 
273 aa  252  4.0000000000000004e-66  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  54.85 
 
 
286 aa  251  1e-65  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  51.32 
 
 
271 aa  249  3e-65  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  51.87 
 
 
279 aa  246  3e-64  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_009380  Strop_2396  short-chain dehydrogenase/reductase SDR  50.92 
 
 
321 aa  233  2.0000000000000002e-60  Salinispora tropica CNB-440  Bacteria  normal  0.13478  normal 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  47.57 
 
 
278 aa  228  1e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  44.19 
 
 
279 aa  226  3e-58  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_013131  Caci_5627  short-chain dehydrogenase/reductase SDR  46.49 
 
 
282 aa  218  8.999999999999998e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.193827 
 
 
-
 
NC_008347  Mmar10_1139  short-chain dehydrogenase/reductase SDR  51.47 
 
 
277 aa  218  1e-55  Maricaulis maris MCS10  Bacteria  normal  0.248176  normal  0.05597 
 
 
-
 
NC_009953  Sare_2544  short-chain dehydrogenase/reductase SDR  50.39 
 
 
313 aa  204  1e-51  Salinispora arenicola CNS-205  Bacteria  normal  0.638785  decreased coverage  0.00000422955 
 
 
-
 
NC_009523  RoseRS_2412  short-chain dehydrogenase/reductase SDR  51.53 
 
 
269 aa  197  2.0000000000000003e-49  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00185291  normal 
 
 
-
 
NC_009524  PsycPRwf_0304  short-chain dehydrogenase/reductase SDR  40.07 
 
 
309 aa  194  1e-48  Psychrobacter sp. PRwf-1  Bacteria  normal  0.074209  normal  0.817715 
 
 
-
 
NC_013739  Cwoe_5665  short-chain dehydrogenase/reductase SDR  43.87 
 
 
275 aa  191  1e-47  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  40.75 
 
 
271 aa  185  7e-46  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  41.38 
 
 
276 aa  184  1.0000000000000001e-45  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  41.61 
 
 
302 aa  181  9.000000000000001e-45  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  41.61 
 
 
302 aa  181  9.000000000000001e-45  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  41.61 
 
 
302 aa  181  9.000000000000001e-45  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  41.24 
 
 
302 aa  180  2e-44  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  41.24 
 
 
302 aa  180  2e-44  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  41.24 
 
 
302 aa  180  2.9999999999999997e-44  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  41.24 
 
 
302 aa  180  2.9999999999999997e-44  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  42.35 
 
 
275 aa  179  4e-44  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  40.07 
 
 
295 aa  179  4e-44  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  40.07 
 
 
295 aa  178  9e-44  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  38.15 
 
 
296 aa  176  4e-43  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  37.64 
 
 
296 aa  175  7e-43  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  42.44 
 
 
300 aa  175  7e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  39.16 
 
 
295 aa  175  7e-43  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_007650  BTH_II0404  short chain dehydrogenase/reductase family oxidoreductase  40.15 
 
 
302 aa  174  9.999999999999999e-43  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  42.44 
 
 
300 aa  174  9.999999999999999e-43  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  37.64 
 
 
296 aa  174  9.999999999999999e-43  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  42.44 
 
 
300 aa  174  9.999999999999999e-43  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  42.86 
 
 
280 aa  174  9.999999999999999e-43  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  38.29 
 
 
276 aa  174  9.999999999999999e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  42.44 
 
 
300 aa  173  1.9999999999999998e-42  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  37.31 
 
 
311 aa  172  3.9999999999999995e-42  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  36.98 
 
 
312 aa  172  5.999999999999999e-42  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  41.7 
 
 
300 aa  171  7.999999999999999e-42  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  35.85 
 
 
307 aa  171  1e-41  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  36.23 
 
 
309 aa  171  1e-41  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  36.23 
 
 
309 aa  171  1e-41  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  41.33 
 
 
308 aa  170  2e-41  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  38.7 
 
 
276 aa  170  3e-41  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  38.7 
 
 
276 aa  170  3e-41  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  41.33 
 
 
308 aa  170  3e-41  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  38.7 
 
 
276 aa  170  3e-41  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  36.98 
 
 
312 aa  169  3e-41  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  40.38 
 
 
276 aa  169  5e-41  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  35.85 
 
 
309 aa  169  6e-41  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  37.17 
 
 
276 aa  167  2e-40  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  37.12 
 
 
315 aa  166  2.9999999999999998e-40  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  42.31 
 
 
275 aa  166  2.9999999999999998e-40  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_009338  Mflv_2216  short-chain dehydrogenase/reductase SDR  37.55 
 
 
276 aa  165  8e-40  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.742045 
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  36.36 
 
 
308 aa  165  9e-40  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  36.36 
 
 
308 aa  165  9e-40  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  36.36 
 
 
308 aa  165  9e-40  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  36.36 
 
 
308 aa  165  9e-40  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  36.36 
 
 
308 aa  165  9e-40  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_010676  Bphyt_4878  short-chain dehydrogenase/reductase SDR  36.3 
 
 
302 aa  155  7e-37  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00176242  normal  0.778008 
 
 
-
 
NC_007952  Bxe_B1790  short chain dehydrogenase  37.04 
 
 
307 aa  154  2e-36  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00000125648 
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  40.22 
 
 
282 aa  149  3e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_008009  Acid345_2393  short chain dehydrogenase  36.26 
 
 
344 aa  147  1.0000000000000001e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.895738 
 
 
-
 
NC_009664  Krad_2525  short-chain dehydrogenase/reductase SDR  36.29 
 
 
276 aa  145  8.000000000000001e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0175  short-chain dehydrogenase/reductase SDR  40.96 
 
 
267 aa  140  1.9999999999999998e-32  Meiothermus ruber DSM 1279  Bacteria  normal  0.319176  normal 
 
 
-
 
NC_013174  Jden_0145  short-chain dehydrogenase/reductase SDR  35.29 
 
 
267 aa  140  1.9999999999999998e-32  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_2306  short-chain dehydrogenase/reductase SDR  38.46 
 
 
286 aa  139  7e-32  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.930868  n/a   
 
 
-
 
NC_011831  Cagg_3168  short-chain dehydrogenase/reductase SDR  41.84 
 
 
269 aa  138  7.999999999999999e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.685444  normal 
 
 
-
 
NC_009338  Mflv_4313  short chain dehydrogenase  35.09 
 
 
290 aa  138  1e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0294  short-chain dehydrogenase/reductase SDR  37.17 
 
 
262 aa  136  5e-31  Mycobacterium sp. JLS  Bacteria  normal  0.948025  normal 
 
 
-
 
NC_011145  AnaeK_1565  short-chain dehydrogenase/reductase SDR  38.1 
 
 
286 aa  135  7.000000000000001e-31  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0303  short-chain dehydrogenase/reductase SDR  37.17 
 
 
262 aa  135  8e-31  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0313  short-chain dehydrogenase/reductase SDR  37.17 
 
 
262 aa  135  8e-31  Mycobacterium sp. KMS  Bacteria  normal  normal  0.19239 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  32.82 
 
 
264 aa  132  5e-30  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_013440  Hoch_5364  short-chain dehydrogenase/reductase SDR  37.31 
 
 
267 aa  132  6.999999999999999e-30  Haliangium ochraceum DSM 14365  Bacteria  normal  0.676071  normal 
 
 
-
 
NC_013169  Ksed_03130  short-chain dehydrogenase of unknown substrate specificity  35.88 
 
 
275 aa  131  1.0000000000000001e-29  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_1643  short-chain dehydrogenase/reductase SDR  37.36 
 
 
286 aa  131  1.0000000000000001e-29  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1321  short-chain dehydrogenase/reductase SDR  38.85 
 
 
271 aa  131  1.0000000000000001e-29  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.318083 
 
 
-
 
NC_013061  Phep_3027  short-chain dehydrogenase/reductase SDR  33.59 
 
 
272 aa  131  1.0000000000000001e-29  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00333155 
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  36.92 
 
 
269 aa  130  2.0000000000000002e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_013131  Caci_5146  short-chain dehydrogenase/reductase SDR  41.5 
 
 
285 aa  130  3e-29  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00800542  normal  0.26199 
 
 
-
 
NC_011757  Mchl_4114  short-chain dehydrogenase/reductase SDR  35.66 
 
 
273 aa  129  4.0000000000000003e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.953941  normal 
 
 
-
 
NC_011369  Rleg2_0558  short chain dehydrogenase  31.6 
 
 
272 aa  129  6e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.449424 
 
 
-
 
NC_004578  PSPTO_1861  oxidoreductase, short chain dehydrogenase/reductase family  34.09 
 
 
270 aa  129  8.000000000000001e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0952097  n/a   
 
 
-
 
NC_008009  Acid345_0796  short-chain dehydrogenase/reductase SDR  33.33 
 
 
281 aa  127  2.0000000000000002e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.35999 
 
 
-
 
NC_007413  Ava_2596  Short-chain dehydrogenase/reductase SDR  32.24 
 
 
287 aa  126  4.0000000000000003e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  0.7335  normal 
 
 
-
 
NC_009425  Ent638_4222  short-chain dehydrogenase/reductase SDR  40.21 
 
 
242 aa  126  4.0000000000000003e-28  Enterobacter sp. 638  Bacteria  normal  0.186526  normal 
 
 
-
 
NC_009720  Xaut_2977  short-chain dehydrogenase/reductase SDR  37.78 
 
 
268 aa  126  4.0000000000000003e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.690113 
 
 
-
 
NC_008726  Mvan_2034  short chain dehydrogenase  34.47 
 
 
290 aa  126  4.0000000000000003e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.959562 
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  34.5 
 
 
266 aa  126  5e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_011738  PCC7424_5709  short-chain dehydrogenase/reductase SDR  34.87 
 
 
347 aa  125  6e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009511  Swit_1698  short-chain dehydrogenase/reductase SDR  40.86 
 
 
298 aa  125  9e-28  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_2712  short chain dehydrogenase  38.92 
 
 
263 aa  125  1e-27  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
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