| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3066 |
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| Symbol | |
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| ID | 5540562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3970412 |
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| End bp | 3971233 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895185 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001433138 |
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| Protein GI | 156743009 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.172953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGTC GCATGCAGCT GGCAAACCGG ACAGCAGTGG TCACCGGCGC AGCAAGCGGC
ATTGGCAGAG CGATTGCCCT ATCGCTGGCG CGTCGCTGCT GCCACCTTGC GCTGGCGGAC
ATCGACGAAG CGGGGATGGC GCACACAGCG GCGTTGATCG CGCCCCACCA CGTGCGTGTC
AGTTGCCATT GCCTCGATGT GTCCGATGCC ATTGCGGTCG CTGCGCTGCC AGAGGCGGTG
CGTTGCGCGC ACGGCGGCGT GGATCTGTTG TTCAATAACG CAGGTGTAGC GATGTGGGGC
AATTTCGATC AGGTCAGCGA TGCCGACTTT GAGTGGTTGT TCGCCATTAA CTTCCACGGT
CTCGTGCATA TGACGCGCGC ATTTCTGCCG CTGCTGAAAG CAAGCGACGA TGCGCGCCTG
GTGAACATTT CGAGCGTTTT CGGGCTTGTC GCGCCTTCAG GTCAGGCGGC ATACGCCGCC
AGCAAATTCG CAGTGCGCGG GTTCTCCGAG GCGCTCCGAC ACGAACTCGA GCATACGTCG
GTCGGAGTGA CAGTCGTCTT TCCTGGCGGC GTGGCAACTG CTATTTCCGA GCGTGCGCGC
CAACCGGCAG CAATGTCGCG CGCGGAGGTC GAACAGGGGC TGGCGCGATC ACGCCGATTG
CTGACTCTGC CGCCGGAAGT CGCCGGCGAA ACCATTGTCA GAAGCGTCGA GCAGCGCAAA
GCGCGGGTAC TGATCGGACG CGACGCACGC CTGATCGACC TGCTTGTGCG CCTGGCGCCC
GTCTCGTACT GGAGCATTAT GCGGCGTGTG ATGGGGCGCT GA
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| Protein sequence | MARRMQLANR TAVVTGAASG IGRAIALSLA RRCCHLALAD IDEAGMAHTA ALIAPHHVRV
SCHCLDVSDA IAVAALPEAV RCAHGGVDLL FNNAGVAMWG NFDQVSDADF EWLFAINFHG
LVHMTRAFLP LLKASDDARL VNISSVFGLV APSGQAAYAA SKFAVRGFSE ALRHELEHTS
VGVTVVFPGG VATAISERAR QPAAMSRAEV EQGLARSRRL LTLPPEVAGE TIVRSVEQRK
ARVLIGRDAR LIDLLVRLAP VSYWSIMRRV MGR
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