More than 300 homologs were found in PanDaTox collection
for query gene Rcas_3066 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  100 
 
 
273 aa  545  1e-154  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_009523  RoseRS_2412  short-chain dehydrogenase/reductase SDR  77.32 
 
 
269 aa  363  1e-99  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00185291  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  59.02 
 
 
281 aa  319  3.9999999999999996e-86  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  57.68 
 
 
271 aa  299  4e-80  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4692  short-chain dehydrogenase/reductase SDR  56.83 
 
 
274 aa  276  2e-73  Methylobacterium populi BJ001  Bacteria  normal  0.169711  normal  0.0760952 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  51.1 
 
 
273 aa  261  1e-68  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4179  short-chain dehydrogenase/reductase SDR  56.13 
 
 
274 aa  259  3e-68  Methylobacterium extorquens PA1  Bacteria  normal  0.719073  normal 
 
 
-
 
NC_011757  Mchl_4548  short-chain dehydrogenase/reductase SDR  54.98 
 
 
274 aa  257  2e-67  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.239905  normal  0.858139 
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  50.58 
 
 
279 aa  250  2e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  51.43 
 
 
281 aa  239  4e-62  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  46.1 
 
 
279 aa  234  2.0000000000000002e-60  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_010511  M446_3686  short-chain dehydrogenase/reductase SDR  51.1 
 
 
273 aa  233  2.0000000000000002e-60  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00031135 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  46.27 
 
 
278 aa  224  9e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  45.19 
 
 
295 aa  224  1e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  44.65 
 
 
295 aa  223  2e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  44.81 
 
 
296 aa  223  4e-57  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  44.44 
 
 
296 aa  222  4.9999999999999996e-57  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2396  short-chain dehydrogenase/reductase SDR  51.15 
 
 
321 aa  222  7e-57  Salinispora tropica CNB-440  Bacteria  normal  0.13478  normal 
 
 
-
 
NC_007650  BTH_II0404  short chain dehydrogenase/reductase family oxidoreductase  46.35 
 
 
302 aa  221  9e-57  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  47.35 
 
 
302 aa  220  1.9999999999999999e-56  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  47.35 
 
 
302 aa  220  1.9999999999999999e-56  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_0304  short-chain dehydrogenase/reductase SDR  44.03 
 
 
309 aa  220  1.9999999999999999e-56  Psychrobacter sp. PRwf-1  Bacteria  normal  0.074209  normal  0.817715 
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  47.35 
 
 
302 aa  220  1.9999999999999999e-56  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  47.35 
 
 
302 aa  220  1.9999999999999999e-56  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  47.35 
 
 
302 aa  220  1.9999999999999999e-56  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  46.97 
 
 
302 aa  219  3.9999999999999997e-56  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  46.97 
 
 
302 aa  219  3.9999999999999997e-56  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  45.69 
 
 
286 aa  217  2e-55  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_008347  Mmar10_1139  short-chain dehydrogenase/reductase SDR  48.16 
 
 
277 aa  217  2e-55  Maricaulis maris MCS10  Bacteria  normal  0.248176  normal  0.05597 
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  45.28 
 
 
308 aa  214  9.999999999999999e-55  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  45.28 
 
 
308 aa  214  9.999999999999999e-55  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  45.28 
 
 
308 aa  214  9.999999999999999e-55  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  45.28 
 
 
308 aa  214  9.999999999999999e-55  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  45.28 
 
 
308 aa  214  9.999999999999999e-55  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  46.49 
 
 
300 aa  214  1.9999999999999998e-54  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  45.28 
 
 
315 aa  213  1.9999999999999998e-54  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  46.49 
 
 
300 aa  213  2.9999999999999995e-54  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  46.49 
 
 
300 aa  213  2.9999999999999995e-54  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  46.13 
 
 
300 aa  211  7.999999999999999e-54  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  45.49 
 
 
271 aa  211  7.999999999999999e-54  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  43.7 
 
 
309 aa  210  2e-53  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  46.3 
 
 
300 aa  211  2e-53  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  43.7 
 
 
312 aa  210  2e-53  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  43.7 
 
 
309 aa  210  2e-53  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_013131  Caci_5627  short-chain dehydrogenase/reductase SDR  45.45 
 
 
282 aa  209  6e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.193827 
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  43.33 
 
 
311 aa  208  8e-53  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  42.96 
 
 
312 aa  208  8e-53  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  44.98 
 
 
308 aa  207  1e-52  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  43.33 
 
 
309 aa  207  1e-52  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  44.98 
 
 
308 aa  207  2e-52  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  43.12 
 
 
307 aa  206  3e-52  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  44.11 
 
 
295 aa  206  3e-52  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  43.49 
 
 
296 aa  204  9e-52  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  45.59 
 
 
280 aa  202  4e-51  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  42.75 
 
 
276 aa  198  1.0000000000000001e-49  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_009953  Sare_2544  short-chain dehydrogenase/reductase SDR  52.63 
 
 
313 aa  197  1.0000000000000001e-49  Salinispora arenicola CNS-205  Bacteria  normal  0.638785  decreased coverage  0.00000422955 
 
 
-
 
NC_007952  Bxe_B1790  short chain dehydrogenase  42.7 
 
 
307 aa  194  1e-48  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00000125648 
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  44.57 
 
 
276 aa  193  2e-48  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_010676  Bphyt_4878  short-chain dehydrogenase/reductase SDR  41.61 
 
 
302 aa  192  4e-48  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00176242  normal  0.778008 
 
 
-
 
NC_013739  Cwoe_5665  short-chain dehydrogenase/reductase SDR  45.62 
 
 
275 aa  192  5e-48  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  42.91 
 
 
275 aa  186  5e-46  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  40.07 
 
 
276 aa  184  2.0000000000000003e-45  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  40.07 
 
 
276 aa  184  2.0000000000000003e-45  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  40.07 
 
 
276 aa  184  2.0000000000000003e-45  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  39.93 
 
 
276 aa  182  7e-45  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  38.29 
 
 
276 aa  182  7e-45  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  43.84 
 
 
275 aa  179  2.9999999999999997e-44  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  44.27 
 
 
282 aa  179  4.999999999999999e-44  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_009338  Mflv_2216  short-chain dehydrogenase/reductase SDR  38.6 
 
 
276 aa  177  2e-43  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.742045 
 
 
-
 
NC_009664  Krad_2525  short-chain dehydrogenase/reductase SDR  39.69 
 
 
276 aa  171  1e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0294  short-chain dehydrogenase/reductase SDR  43.36 
 
 
262 aa  171  2e-41  Mycobacterium sp. JLS  Bacteria  normal  0.948025  normal 
 
 
-
 
NC_008146  Mmcs_0303  short-chain dehydrogenase/reductase SDR  42.58 
 
 
262 aa  167  2e-40  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0313  short-chain dehydrogenase/reductase SDR  42.58 
 
 
262 aa  167  2e-40  Mycobacterium sp. KMS  Bacteria  normal  normal  0.19239 
 
 
-
 
NC_013946  Mrub_0175  short-chain dehydrogenase/reductase SDR  43.15 
 
 
267 aa  160  2e-38  Meiothermus ruber DSM 1279  Bacteria  normal  0.319176  normal 
 
 
-
 
NC_011831  Cagg_3168  short-chain dehydrogenase/reductase SDR  41.86 
 
 
269 aa  160  3e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.685444  normal 
 
 
-
 
NC_013174  Jden_0145  short-chain dehydrogenase/reductase SDR  35.56 
 
 
267 aa  149  4e-35  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2034  short chain dehydrogenase  36.63 
 
 
290 aa  145  6e-34  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.959562 
 
 
-
 
NC_009338  Mflv_4313  short chain dehydrogenase  34.05 
 
 
290 aa  139  3.9999999999999997e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13074  short chain dehydrogenase  36.4 
 
 
287 aa  139  3.9999999999999997e-32  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.486367 
 
 
-
 
NC_010338  Caul_4322  short chain dehydrogenase  41.74 
 
 
269 aa  139  4.999999999999999e-32  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4287  short-chain dehydrogenase/reductase SDR  39.76 
 
 
276 aa  139  7e-32  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0836216  n/a   
 
 
-
 
NC_013169  Ksed_03130  short-chain dehydrogenase of unknown substrate specificity  35.91 
 
 
275 aa  135  5e-31  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5364  short-chain dehydrogenase/reductase SDR  37.36 
 
 
267 aa  132  3.9999999999999996e-30  Haliangium ochraceum DSM 14365  Bacteria  normal  0.676071  normal 
 
 
-
 
NC_009077  Mjls_1791  short chain dehydrogenase  34.07 
 
 
285 aa  132  6e-30  Mycobacterium sp. JLS  Bacteria  normal  0.0146977  normal 
 
 
-
 
NC_009439  Pmen_1244  short chain dehydrogenase  39.34 
 
 
270 aa  132  7.999999999999999e-30  Pseudomonas mendocina ymp  Bacteria  normal  0.542872  normal  0.404553 
 
 
-
 
NC_008146  Mmcs_1810  short chain dehydrogenase  33.7 
 
 
285 aa  131  1.0000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1857  short chain dehydrogenase  33.7 
 
 
285 aa  131  1.0000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  normal  0.160159 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  31.89 
 
 
263 aa  131  2.0000000000000002e-29  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  31.89 
 
 
321 aa  130  2.0000000000000002e-29  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2840  short chain dehydrogenase  33.81 
 
 
302 aa  130  2.0000000000000002e-29  Nocardioides sp. JS614  Bacteria  normal  0.28747  n/a   
 
 
-
 
NC_007005  Psyr_3753  short chain dehydrogenase  33.96 
 
 
294 aa  130  3e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0637159 
 
 
-
 
NC_007348  Reut_B3851  Short-chain dehydrogenase/reductase SDR:glucose/ribitol dehydrogenase  38.81 
 
 
277 aa  129  4.0000000000000003e-29  Ralstonia eutropha JMP134  Bacteria  normal  0.277606  n/a   
 
 
-
 
NC_009943  Dole_2823  short chain dehydrogenase  31.85 
 
 
292 aa  129  6e-29  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00207351  n/a   
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  40.31 
 
 
269 aa  128  1.0000000000000001e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_007958  RPD_2691  short-chain dehydrogenase/reductase SDR  33.78 
 
 
322 aa  126  3e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.16655  normal 
 
 
-
 
NC_011004  Rpal_3087  short-chain dehydrogenase/reductase SDR  38.94 
 
 
322 aa  125  5e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1627  oxidoreductase, short chain dehydrogenase/reductase family  33.33 
 
 
271 aa  125  7e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0861444  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  32.79 
 
 
264 aa  125  8.000000000000001e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1861  oxidoreductase, short chain dehydrogenase/reductase family  33.58 
 
 
270 aa  125  9e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0952097  n/a   
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  37.26 
 
 
257 aa  124  1e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
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