Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4855 |
Symbol | |
ID | 7110950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 5388119 |
End bp | 5388943 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643483068 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002380080 |
Protein GI | 218441751 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACT TAAATCAAGC CGTAATCCTT CTAACCGGAG CAACCGGAGG ATTTGGACAA GAATTTACCC GACAACTCTT AAAACAAAAT AGTAGACTAA TCTTAAGCGA TCGAGAAGAA AACAAATTAC TCGAACAAAC CCAAAACATC CAACAAGAAA TAACCACAGG AGAAATCATC GCTTGTCTAG TCGCCGATTT ATCTTCCCCC CAAGGATGCC AAAGCCTCTA TAATCAAGTA AAAACCCTCA ACATACCCAT TGATATATTA ATCAACAACG CAGGAATCGC ACTATACGGA CGCACCGACG AAGTTCCGAC GCAAAAATGG GAAGAACTAA TGCAAATCAA CCTATTAGCC CCCATGCGTT TAACTAGCTT AATTATCCCC GACATGATCA CTCGTCAGAA AGGGCACATT GTTAACATTT CCTCCGTTGC CGGTTGGATA GCCCTCCCTG GTATGACACA TTATGCCACC AGTAAATATG GATTGCGAGG ATTTAGCGAA GGACTAGCCG CAGAAACCAA AGCTTATAAT ATTAAAGTAA GTGCAGTCTA TCCCTTTTTC AGCCGGACTC CTATCCTTCA ATCCCCACGA TATGGAACAC TAGCCCAAGA AGTTCAAGAC ATATCCTCAG ACATAGCCAC CGATCCAGCC CAAATTATAG CTCAAACCCT CAAAGGAATT CGGGAAAATC GAGCCAATAT ATTTCCCGAT GCAATGGGTA AAAGAATCCA ATTTCTCAAA CGATACTCCC CAGACTTATT ACACTGGATA GTTGAAAGAA TAAGTAACAA GATAAAAAAA CATGATTATC AATAA
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Protein sequence | MTNLNQAVIL LTGATGGFGQ EFTRQLLKQN SRLILSDREE NKLLEQTQNI QQEITTGEII ACLVADLSSP QGCQSLYNQV KTLNIPIDIL INNAGIALYG RTDEVPTQKW EELMQINLLA PMRLTSLIIP DMITRQKGHI VNISSVAGWI ALPGMTHYAT SKYGLRGFSE GLAAETKAYN IKVSAVYPFF SRTPILQSPR YGTLAQEVQD ISSDIATDPA QIIAQTLKGI RENRANIFPD AMGKRIQFLK RYSPDLLHWI VERISNKIKK HDYQ
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