| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1861 |
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| Symbol | |
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| ID | 1183506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2034565 |
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| End bp | 2035377 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393240 |
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| Product | oxidoreductase, short chain dehydrogenase/reductase family |
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| Protein accession | NP_791685 |
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| Protein GI | 28869066 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0952097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAT CGTCCAAAAA AACCGCCATC GTCACCGGCG CATCCTCCGG TATCGGTCGC
GCGACGGCCG AAGCGCTGGT GCGGGCGGGC TATACCGTAT TTGGCACAAC CCGCAAGGTC
GGCGACAGCT CGACGCAAGT GTCGATGCTC ACGTGCGACG TGACCAACGA TGAGTCTGTC
GCCACGCTCG TTTCCACCGT ACTCGCGCGG ACCGGGCGCA TCGACCTGCT GGTCAACAAC
GCCGGTATTG GCCTGGTGGG GGGTGCTGAA GAGTTTTCGA TCCCACAGGT GCAGGCACTG
TTCGATGTCA ACCTGTTCGG CGTCATCCGC ATGACCAACG CAGTACTACC ATCGATGCGC
CAACGTGGCG AAGGACGCAT CATCAATATC GGCTCGATCC TGGGCTTGAT ACCCGCGCCC
TACTCTTCTC ATTATTCGGC GGTCAAGCAC GCGGTGGAGG GCTATTCGGA GTCACTTGAT
CACGAAGTTC GCGCCTTCAA TATCCGGGTC TCGGTCGTCG AGCCGGGATT TGTGCGAACC
GTCTTCGATC AAAACGGCAT TGAGCCGGAT TCGCCCCTGA AGGAATACGA TCAGGCCCGC
GCCGGGTTCA AGGCATTGCT GGCCGATGTC ATGCCAAAAG CCGACCTGCC GGAAGTGGTG
GCGGCGGTCG TGCTGAAGGC GGCGAACGAC ACCCGCCCAA AGCATCGCTA CACGGCCGGC
AAGAGCGCTC GACAAATCAG CCTGCTGCGC CGGTTTGTGC CGACGGCGGC GTTTGACAAA
AGTTTGCGCA AGCAACTTCG TTTGCCGGTT TAA
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| Protein sequence | MSTSSKKTAI VTGASSGIGR ATAEALVRAG YTVFGTTRKV GDSSTQVSML TCDVTNDESV
ATLVSTVLAR TGRIDLLVNN AGIGLVGGAE EFSIPQVQAL FDVNLFGVIR MTNAVLPSMR
QRGEGRIINI GSILGLIPAP YSSHYSAVKH AVEGYSESLD HEVRAFNIRV SVVEPGFVRT
VFDQNGIEPD SPLKEYDQAR AGFKALLADV MPKADLPEVV AAVVLKAAND TRPKHRYTAG
KSARQISLLR RFVPTAAFDK SLRKQLRLPV
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