| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1244 |
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| Symbol | |
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| ID | 5109060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1404084 |
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| End bp | 1404896 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502469 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001186741 |
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| Protein GI | 146306276 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.542872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.404553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACC GCATGATGAT CACTGGCGCT GGTTCCGGAT TGGGACGTGA GATCGCGCTG
CGCTGGGCCC GGGAGGGCTG GCGTCTGGCC CTGGCCGATA TCAACGAGGC GGGCCTGGCC
GAGACCCTCA AGCTGGTGCG CGAAGCGGGC GGTGACGGCT TCACCCGTCG TTGCGACGTG
CGTGACTACA GCCAGCTGAC GGCGCTGGCG CAGGCGTGCG AGGAGCAGTT CGGCGGCATC
GACATCATCG TCAACAACGC CGGGGTCGCC TCGGGCGGCT TTTTCGACGA GCTGTCGCTC
GAGGACTGGG ACTGGCAGAT CTCCATCAAC CTGATGGGCG TCGTCAAAGG CTGCAAGGCC
TTCCTGCCGC TGCTGCAGCG CAGCAAGGGC AAGATCGTCA ACATCGCCTC GATGGCCGCA
CTGATGCAGG GGCCGGCGAT GAGCAACTAC AACGTGGCCA AGGCCGGCGT GGTCGCGCTG
TCGGAAAGTC TGCTGATCGA GCTGCGTCAG CAGGAGATCG GTGTGCACGT GGTCTGCCCG
TCGTTCTTCC AGACCAATCT GCTGGACTCC TTTCGCGGGC CAACCCCTGC GATGAAGGCG
CAGGTGGGCA AGTTGCTGGA AAGCTCGCCG ATCAGCGCGG CCGACATCGC CGAGTACATC
CACGCGGAGA TGGCCAAGGG CAGCTTCATG ATCCTGCCGC ATGAAATGGG GCGCATGGCC
TGGGCGCTGA AGCAGAAGAA TCCGCAGGCG CTGTATGACG AGATGGCCAA CATGGCCGAG
AAGATGCGCA GCAAGGGCAA GGCTGCAAAC TGA
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| Protein sequence | MQNRMMITGA GSGLGREIAL RWAREGWRLA LADINEAGLA ETLKLVREAG GDGFTRRCDV
RDYSQLTALA QACEEQFGGI DIIVNNAGVA SGGFFDELSL EDWDWQISIN LMGVVKGCKA
FLPLLQRSKG KIVNIASMAA LMQGPAMSNY NVAKAGVVAL SESLLIELRQ QEIGVHVVCP
SFFQTNLLDS FRGPTPAMKA QVGKLLESSP ISAADIAEYI HAEMAKGSFM ILPHEMGRMA
WALKQKNPQA LYDEMANMAE KMRSKGKAAN
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