Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3013 |
Symbol | |
ID | 8020695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3182384 |
End bp | 3183274 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644831809 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002982954 |
Protein GI | 241664594 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTCAT TCAATAATCA GGTTGCCGCC ATTACGGGTG CCGCGTCGGG CATGGGCCGA TCGCTGGCGC TGCAGTTGGC CCGCGAAGGC TGCCACCTCG CGCTGGCCGA TCGCAATGAA GCGGCGCTCG CGCAGACGCT GCAACTGGTG CGCGCGCATG AAGGCGACCG GATCCGCGTG ACCACGCACG CCGTGGACGT AGCCGACCGC GCCGCCGTGT ACCGCTGGGC CGAGGAAGCG GCCGCTGCGC ACGGCAAGGT CAACCTGATC TTCAACAACG CGGGCGTGGC GCTGTCCAGC ACGATCGAAG GCATGGAAGA CGACGAGCTG GCCTGGATCA TGAACATCAA CTTCTGGGGC GTCGTGCACG GTACCAAGGC GTTCCTGCCG CTGCTCAAGG CAACGGGCAA CGGCCACATC ATCAATACGT CGAGCATCTT CGGCATCTTC GCGCAGCCGG GCATGGGCGC GTACAACGCC AGCAAGTACG CCGTACGCGG CTACACCGAA GCGCTGCGCC AGGAACTCGA TCTGATGGAC TGCGGCGTGT CGGCCACGTG TGTCCACCCG GGCGGCATCA AGACCAATAT TGCCAAGTCG AGCCGCGTCT CGCCGAGCAT GAACGGCTTT CTGGTGCGCG ACGAACAGCA GGGCAAGGCC GAGTTCGAGA AGTTCTTCAT CACCTCGGCA GACAAGGCCG CGCAGGTGAT CCTGGATGGC GTGCGCAAGA ACAAGCGCCG CGTGCTGATC GGCCCCGACG CGCACGCTGC AGACGTGATG GCCCGCGTGC TGCCTGCCGC GTATCAGGCG CTGGTCGTGC GCGAAGCCCG CCGCACGCGC AAGAAGGCAC TGCGCGACGA TACGGCGCCG GCCACCGCGC GCGCCAAGTA G
|
Protein sequence | MKSFNNQVAA ITGAASGMGR SLALQLAREG CHLALADRNE AALAQTLQLV RAHEGDRIRV TTHAVDVADR AAVYRWAEEA AAAHGKVNLI FNNAGVALSS TIEGMEDDEL AWIMNINFWG VVHGTKAFLP LLKATGNGHI INTSSIFGIF AQPGMGAYNA SKYAVRGYTE ALRQELDLMD CGVSATCVHP GGIKTNIAKS SRVSPSMNGF LVRDEQQGKA EFEKFFITSA DKAAQVILDG VRKNKRRVLI GPDAHAADVM ARVLPAAYQA LVVREARRTR KKALRDDTAP ATARAK
|
| |