Gene Rpic12D_3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3013 
Symbol 
ID8020695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3182384 
End bp3183274 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content66% 
IMG OID644831809 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002982954 
Protein GI241664594 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAT TCAATAATCA GGTTGCCGCC ATTACGGGTG CCGCGTCGGG CATGGGCCGA 
TCGCTGGCGC TGCAGTTGGC CCGCGAAGGC TGCCACCTCG CGCTGGCCGA TCGCAATGAA
GCGGCGCTCG CGCAGACGCT GCAACTGGTG CGCGCGCATG AAGGCGACCG GATCCGCGTG
ACCACGCACG CCGTGGACGT AGCCGACCGC GCCGCCGTGT ACCGCTGGGC CGAGGAAGCG
GCCGCTGCGC ACGGCAAGGT CAACCTGATC TTCAACAACG CGGGCGTGGC GCTGTCCAGC
ACGATCGAAG GCATGGAAGA CGACGAGCTG GCCTGGATCA TGAACATCAA CTTCTGGGGC
GTCGTGCACG GTACCAAGGC GTTCCTGCCG CTGCTCAAGG CAACGGGCAA CGGCCACATC
ATCAATACGT CGAGCATCTT CGGCATCTTC GCGCAGCCGG GCATGGGCGC GTACAACGCC
AGCAAGTACG CCGTACGCGG CTACACCGAA GCGCTGCGCC AGGAACTCGA TCTGATGGAC
TGCGGCGTGT CGGCCACGTG TGTCCACCCG GGCGGCATCA AGACCAATAT TGCCAAGTCG
AGCCGCGTCT CGCCGAGCAT GAACGGCTTT CTGGTGCGCG ACGAACAGCA GGGCAAGGCC
GAGTTCGAGA AGTTCTTCAT CACCTCGGCA GACAAGGCCG CGCAGGTGAT CCTGGATGGC
GTGCGCAAGA ACAAGCGCCG CGTGCTGATC GGCCCCGACG CGCACGCTGC AGACGTGATG
GCCCGCGTGC TGCCTGCCGC GTATCAGGCG CTGGTCGTGC GCGAAGCCCG CCGCACGCGC
AAGAAGGCAC TGCGCGACGA TACGGCGCCG GCCACCGCGC GCGCCAAGTA G
 
Protein sequence
MKSFNNQVAA ITGAASGMGR SLALQLAREG CHLALADRNE AALAQTLQLV RAHEGDRIRV 
TTHAVDVADR AAVYRWAEEA AAAHGKVNLI FNNAGVALSS TIEGMEDDEL AWIMNINFWG
VVHGTKAFLP LLKATGNGHI INTSSIFGIF AQPGMGAYNA SKYAVRGYTE ALRQELDLMD
CGVSATCVHP GGIKTNIAKS SRVSPSMNGF LVRDEQQGKA EFEKFFITSA DKAAQVILDG
VRKNKRRVLI GPDAHAADVM ARVLPAAYQA LVVREARRTR KKALRDDTAP ATARAK