| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0044 |
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| Symbol | |
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| ID | 5774073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 34156 |
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| End bp | 34950 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641315661 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001581382 |
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| Protein GI | 161527556 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGATTTCA AAAACAAAAC AGTATTGATT ACTGGAGCAT CATCTGGAAT CGGAAAGCAA
ACTGCAATTG AATTTGCAAA GCTTGGTGCG AACATAATTC TTGTTGCAAG AAGAAAAGAA
AAGTTGGATG AGCTTGCAAG CGAATTAGAA AAATTCAAAG TAACAACATT TGTCTGCAAA
TGTGATGTCT CAGATAAAAC GCAAGTAAAA GAAATGTCAA AGACTGTTTT AGAAAAATTT
GATTCTGTTG ACGTGTTGGT AAATAATGCT GGTTTTGCAA TTTATGGTTC TGTTAAAGAT
CTATCTGTTG ATGAAATAGA ATCCCAGATG GAAACAAATT ATTTTGGAAT GATGTATTGT
ATCAAAAACT TTCTACCTTC CATGTTGGAT AAAAAATCTG GTCATATAGT CAATGTTGCA
TCAGTTGCTG CAAGCTTTGG CCTTCCTGGA ATTGCATCAT ATTGTGCATC AAAATTTGCA
ATACTAGGAT TTTCAGAGGG TCTTAAACAT GAACTACATG GTACTGGAGT AGGAATTACT
GTTGTTAGTC CAATAATGGT TAGAACAGAC TTTTTTGATC ATCCTTCATT TGAGAAAATG
CCAAAATATT CCCCCACATC ACTTAGTTCT AAAACTGTTG CAAAAGCAAT TCTAAAGGCT
GCAAACTCTC CTAGATTAGA AATTATTGTT CCTTCTGTGG TTAGAAGTGC TGTATGGTTA
AAGCATACAT TTCCTTATTT CATTAACCCT ATCATGGGAA AGTCTTTCAA AAAACAATTA
GACGCTGTAA AGTAA
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| Protein sequence | MDFKNKTVLI TGASSGIGKQ TAIEFAKLGA NIILVARRKE KLDELASELE KFKVTTFVCK
CDVSDKTQVK EMSKTVLEKF DSVDVLVNNA GFAIYGSVKD LSVDEIESQM ETNYFGMMYC
IKNFLPSMLD KKSGHIVNVA SVAASFGLPG IASYCASKFA ILGFSEGLKH ELHGTGVGIT
VVSPIMVRTD FFDHPSFEKM PKYSPTSLSS KTVAKAILKA ANSPRLEIIV PSVVRSAVWL
KHTFPYFINP IMGKSFKKQL DAVK
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