More than 300 homologs were found in PanDaTox collection
for query gene Mpop_4692 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010725  Mpop_4692  short-chain dehydrogenase/reductase SDR  100 
 
 
274 aa  530  1e-150  Methylobacterium populi BJ001  Bacteria  normal  0.169711  normal  0.0760952 
 
 
-
 
NC_011757  Mchl_4548  short-chain dehydrogenase/reductase SDR  90.15 
 
 
274 aa  452  1.0000000000000001e-126  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.239905  normal  0.858139 
 
 
-
 
NC_010172  Mext_4179  short-chain dehydrogenase/reductase SDR  91.21 
 
 
274 aa  452  1.0000000000000001e-126  Methylobacterium extorquens PA1  Bacteria  normal  0.719073  normal 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  65.31 
 
 
273 aa  327  9e-89  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3686  short-chain dehydrogenase/reductase SDR  65.68 
 
 
273 aa  307  2.0000000000000002e-82  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00031135 
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  62.82 
 
 
281 aa  296  2e-79  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  57.36 
 
 
271 aa  292  5e-78  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  57.25 
 
 
273 aa  290  2e-77  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  53.38 
 
 
281 aa  280  2e-74  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  53.56 
 
 
286 aa  251  1e-65  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  49.62 
 
 
279 aa  234  2.0000000000000002e-60  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_009380  Strop_2396  short-chain dehydrogenase/reductase SDR  51.84 
 
 
321 aa  232  5e-60  Salinispora tropica CNB-440  Bacteria  normal  0.13478  normal 
 
 
-
 
NC_008347  Mmar10_1139  short-chain dehydrogenase/reductase SDR  50.55 
 
 
277 aa  231  9e-60  Maricaulis maris MCS10  Bacteria  normal  0.248176  normal  0.05597 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  45.49 
 
 
279 aa  224  1e-57  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_009523  RoseRS_2412  short-chain dehydrogenase/reductase SDR  54.14 
 
 
269 aa  223  2e-57  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00185291  normal 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  46.59 
 
 
278 aa  219  3e-56  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  45.22 
 
 
295 aa  216  5e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  42.39 
 
 
296 aa  206  2e-52  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  42.39 
 
 
296 aa  206  3e-52  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  43.38 
 
 
295 aa  206  3e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_009524  PsycPRwf_0304  short-chain dehydrogenase/reductase SDR  42.16 
 
 
309 aa  205  8e-52  Psychrobacter sp. PRwf-1  Bacteria  normal  0.074209  normal  0.817715 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  41.97 
 
 
295 aa  203  2e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_013131  Caci_5627  short-chain dehydrogenase/reductase SDR  45.39 
 
 
282 aa  203  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.193827 
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  41.89 
 
 
312 aa  201  9.999999999999999e-51  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_009953  Sare_2544  short-chain dehydrogenase/reductase SDR  52.24 
 
 
313 aa  201  9.999999999999999e-51  Salinispora arenicola CNS-205  Bacteria  normal  0.638785  decreased coverage  0.00000422955 
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  40.74 
 
 
307 aa  199  5e-50  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  41.13 
 
 
309 aa  199  5e-50  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  41.13 
 
 
309 aa  199  5e-50  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  40.75 
 
 
309 aa  196  3e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  45.22 
 
 
300 aa  196  3e-49  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  41.03 
 
 
308 aa  196  4.0000000000000005e-49  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  41.03 
 
 
308 aa  196  4.0000000000000005e-49  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  41.03 
 
 
308 aa  196  4.0000000000000005e-49  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  41.13 
 
 
312 aa  196  4.0000000000000005e-49  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  41.03 
 
 
308 aa  196  4.0000000000000005e-49  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  41.03 
 
 
308 aa  196  4.0000000000000005e-49  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  41.39 
 
 
315 aa  196  5.000000000000001e-49  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  44.85 
 
 
308 aa  195  5.000000000000001e-49  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  45.22 
 
 
300 aa  195  6e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  44.85 
 
 
308 aa  195  6e-49  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  45.22 
 
 
300 aa  195  6e-49  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  43.07 
 
 
302 aa  194  1e-48  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  41.82 
 
 
296 aa  194  1e-48  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  43.07 
 
 
302 aa  194  1e-48  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  43.07 
 
 
302 aa  194  1e-48  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  43.07 
 
 
302 aa  194  1e-48  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  43.07 
 
 
302 aa  194  1e-48  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  43.07 
 
 
302 aa  194  2e-48  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  44.85 
 
 
300 aa  194  2e-48  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  40.67 
 
 
311 aa  193  2e-48  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  42.91 
 
 
271 aa  194  2e-48  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  43.07 
 
 
302 aa  194  2e-48  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  44.28 
 
 
300 aa  193  3e-48  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  44.78 
 
 
280 aa  192  7e-48  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  43.94 
 
 
276 aa  191  1e-47  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_007650  BTH_II0404  short chain dehydrogenase/reductase family oxidoreductase  42.65 
 
 
302 aa  190  2e-47  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  44.71 
 
 
275 aa  187  2e-46  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  42.07 
 
 
276 aa  186  2e-46  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  41.73 
 
 
276 aa  186  5e-46  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  42.53 
 
 
276 aa  184  1.0000000000000001e-45  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  42.53 
 
 
276 aa  184  1.0000000000000001e-45  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  42.53 
 
 
276 aa  184  1.0000000000000001e-45  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5665  short-chain dehydrogenase/reductase SDR  42.12 
 
 
275 aa  182  6e-45  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4878  short-chain dehydrogenase/reductase SDR  41.11 
 
 
302 aa  181  8.000000000000001e-45  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00176242  normal  0.778008 
 
 
-
 
NC_007952  Bxe_B1790  short chain dehydrogenase  41.85 
 
 
307 aa  181  1e-44  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00000125648 
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  44.44 
 
 
275 aa  181  1e-44  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  40.84 
 
 
276 aa  180  2e-44  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_009338  Mflv_2216  short-chain dehydrogenase/reductase SDR  40 
 
 
276 aa  178  9e-44  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.742045 
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  43.22 
 
 
282 aa  170  2e-41  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_009338  Mflv_4313  short chain dehydrogenase  34.91 
 
 
290 aa  135  5e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3168  short-chain dehydrogenase/reductase SDR  39.34 
 
 
269 aa  134  9.999999999999999e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.685444  normal 
 
 
-
 
NC_013946  Mrub_0175  short-chain dehydrogenase/reductase SDR  38.1 
 
 
267 aa  134  1.9999999999999998e-30  Meiothermus ruber DSM 1279  Bacteria  normal  0.319176  normal 
 
 
-
 
NC_013441  Gbro_4287  short-chain dehydrogenase/reductase SDR  40.24 
 
 
276 aa  132  5e-30  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0836216  n/a   
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  40.62 
 
 
257 aa  131  1.0000000000000001e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_007760  Adeh_2306  short-chain dehydrogenase/reductase SDR  39.91 
 
 
286 aa  130  2.0000000000000002e-29  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.930868  n/a   
 
 
-
 
NC_011757  Mchl_4114  short-chain dehydrogenase/reductase SDR  35.66 
 
 
273 aa  130  2.0000000000000002e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.953941  normal 
 
 
-
 
NC_009077  Mjls_0294  short-chain dehydrogenase/reductase SDR  35.96 
 
 
262 aa  130  3e-29  Mycobacterium sp. JLS  Bacteria  normal  0.948025  normal 
 
 
-
 
NC_008146  Mmcs_0303  short-chain dehydrogenase/reductase SDR  35.96 
 
 
262 aa  129  5.0000000000000004e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0313  short-chain dehydrogenase/reductase SDR  35.96 
 
 
262 aa  129  5.0000000000000004e-29  Mycobacterium sp. KMS  Bacteria  normal  normal  0.19239 
 
 
-
 
NC_013501  Rmar_1462  short-chain dehydrogenase/reductase SDR  38.97 
 
 
266 aa  129  7.000000000000001e-29  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011885  Cyan7425_0007  short-chain dehydrogenase/reductase SDR  32.49 
 
 
300 aa  128  9.000000000000001e-29  Cyanothece sp. PCC 7425  Bacteria  n/a    normal  0.67964 
 
 
-
 
NC_009664  Krad_2525  short-chain dehydrogenase/reductase SDR  34.63 
 
 
276 aa  128  1.0000000000000001e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3104  short-chain dehydrogenase/reductase SDR  39.65 
 
 
252 aa  127  2.0000000000000002e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0145  short-chain dehydrogenase/reductase SDR  35.42 
 
 
267 aa  125  6e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4322  short chain dehydrogenase  37.21 
 
 
269 aa  125  8.000000000000001e-28  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3791  short-chain dehydrogenase/reductase SDR  35.38 
 
 
273 aa  124  1e-27  Methylobacterium extorquens PA1  Bacteria  normal  0.0700292  normal 
 
 
-
 
NC_010172  Mext_1321  short-chain dehydrogenase/reductase SDR  35.88 
 
 
271 aa  123  3e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.318083 
 
 
-
 
NC_008726  Mvan_2034  short chain dehydrogenase  34.21 
 
 
290 aa  123  4e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.959562 
 
 
-
 
NC_011145  AnaeK_1565  short-chain dehydrogenase/reductase SDR  40.4 
 
 
286 aa  122  6e-27  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3168  short chain dehydrogenase  35.93 
 
 
270 aa  122  6e-27  Polaromonas sp. JS666  Bacteria  normal  0.273274  normal  0.685188 
 
 
-
 
NC_007413  Ava_2965  Short-chain dehydrogenase/reductase SDR  32.81 
 
 
293 aa  122  7e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13074  short chain dehydrogenase  33.7 
 
 
287 aa  122  7e-27  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.486367 
 
 
-
 
NC_012858  Rleg_6615  short chain dehydrogenase  34.1 
 
 
271 aa  122  7e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.522985  normal  0.0823373 
 
 
-
 
NC_011891  A2cp1_1643  short-chain dehydrogenase/reductase SDR  40.4 
 
 
286 aa  121  9.999999999999999e-27  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6404  3-oxoacyl-[acyl-carrier-protein] reductase  36.65 
 
 
246 aa  121  9.999999999999999e-27  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03130  short-chain dehydrogenase of unknown substrate specificity  36.76 
 
 
275 aa  120  1.9999999999999998e-26  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3521  short-chain dehydrogenase/reductase SDR  34.8 
 
 
268 aa  119  3.9999999999999996e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B3095  3-oxoacyl-[acyl-carrier-protein] reductase  36.13 
 
 
246 aa  119  3.9999999999999996e-26  Burkholderia sp. 383  Bacteria  normal  normal  0.025547 
 
 
-
 
NC_008048  Sala_1820  short chain dehydrogenase  35.18 
 
 
267 aa  119  3.9999999999999996e-26  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.187339 
 
 
-
 
NC_008009  Acid345_2393  short chain dehydrogenase  31.25 
 
 
344 aa  119  4.9999999999999996e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.895738 
 
 
-
 
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