| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3569 |
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| Symbol | |
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| ID | 6179547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 505470 |
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| End bp | 506396 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641683338 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001810252 |
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| Protein GI | 172062601 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.683076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00146118 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGGTT TTTCCGGCAA GGTCGCCGCG ATTACGGGCG CCGCCTCCGG CATGGGCCGA
AGCCTCGCGG TCGAGCTCGC GCGGCGCGGC TGCGAGGTCG CGCTCGCCGA CGTCAACGAT
GTCGGGCTCG CCGGCACGGC GGCCGCGTGC GGCAAGCACG GCGTGCGCAC GAGCATGAGG
CGGCTAGACG TCGCCGACCG CGACGCCGTG TTCGCGTGGG CCGATTTCGT GCGCGCCGAA
CACGGCAAGG TCAACCTGGT CTTCAACAAC GCTGGCGTGT CGCTGGCCGC GAGCGCCGAG
ACCGCGCGCA TCGCCGATCT CGAATGGATC GTCGGCATCA ACTTCTGGGG CGTCGTGCAC
GGCACGCAAG CGTTCCTGCC GCATCTGCGC GCGTCGGGCG ATGGGCACGT AATCAACACG
TCGAGCCTGT TCGGGCTCGT CGCGATGCCG ACGCAGAGCG CGTACAACGC GACCAAGTTC
GCGGTGCGCG GCTTCACCGA GGCGCTGCGG ATGGAGCTCG AACTGGACGG CGCGCCGGTC
AGCGCGACCT GCGTGCATCC GGGCGGCGTC GCGACCGGCA TCGTCGACGC GAGCCGCGTC
GACACCAGCA TCCACGCGCT CACGGGCCAG GACGAAGCGA CCCACCGCCG CCAGGCGAAC
CGCCTGATCA ACGCGACGAC GGCCGACGAC GCCGCGCGGC AGATCCTCGC CGGCGTCGAG
CGCAATGCGC GCCGCGTGCT GGTCGGCGCC GATGCGCGGC GCCTCGACCG GATCGCGCGG
CTGCTCGGCG CCGGCTACCA GCAGCTGGTG TTGCGCCACG TGCGCCGCGC CCGCGCACGC
AATCTGTGCC CGAAGGCAGC GGCCGCGGCA GAACGCATGC ACGCGCCGGC CGCACGCCCG
ACTCCACCGA CCAGGGACCT CACATGA
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| Protein sequence | MKGFSGKVAA ITGAASGMGR SLAVELARRG CEVALADVND VGLAGTAAAC GKHGVRTSMR
RLDVADRDAV FAWADFVRAE HGKVNLVFNN AGVSLAASAE TARIADLEWI VGINFWGVVH
GTQAFLPHLR ASGDGHVINT SSLFGLVAMP TQSAYNATKF AVRGFTEALR MELELDGAPV
SATCVHPGGV ATGIVDASRV DTSIHALTGQ DEATHRRQAN RLINATTADD AARQILAGVE
RNARRVLVGA DARRLDRIAR LLGAGYQQLV LRHVRRARAR NLCPKAAAAA ERMHAPAARP
TPPTRDLT
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