| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8731 |
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| Symbol | |
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| ID | 8340123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10123763 |
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| End bp | 10125535 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644961822 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003119387 |
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| Protein GI | 256397823 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.199229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.347677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGG ACGTCCGCAC CTTGGCGGTG ACCGTGGAGG GCGGCAAGCT CTCCGTCCGC
ACGTACGGGG ACCCCTCGAA GCCGATTGTG TTGCTGGTCC ACGGTTATCC CGACACCCAA
GCGGTGTGGG ACGGCATCGT TGCGGAACTC GTTGACGACT TCTACGTCGT CACTTACGAC
ACCCGCGGTA TCGGCGCTTC CAAGGGACCG CTGTTCAAGC ACGGCTATAC GTTGGAGCAC
CTTGCGGACG ACCTCTATGC GGTCGCCGAC GTAGTCGCCC CCGATCGGCC GGTGCATCTG
GTCGGCCACG ACTGGGGTTC CATCCAGGCT TGGGAAGCGG TGACGCGCGC GGACTCCGCA
CAGCGTTTCC TGTCCTATAC GTCCATCTCC GGTCCCTGCC TGGACCACGC TGCTCTGTGG
ACGCGCTCGG GTATCCGTAA GCCGACTCCC AAGGCGGCGG CGCGTTCGCT GAAGCAGGCA
CTCGCGTCTT GGTACATCGT CGTGTTCCAC CTTCCGGTGG GACCGCGAGT GGCGTGGAGG
CTCGGTCTCG CTAAGCAGTG GCCGCGGATC ATCAAAGCTA TAGAGGGAAC CAGACTCGAC
CCCTCCCCGA CTTTGCATAG GGATGGCTCG CGCGGTGTCC TCTACTACCG CGCCAACATG
CTGCCCAAGA TGCGGCGTCC CCAGGAGCGG TCGACCACGG TTCCCGTCCA GGTGCTCACT
CCGACCGGCG ACCGATTCGT GACTCCGGCC CTCGCCGCGC AGGCGCCGGT TCCGTGGACG
GAGCGGCTCT ATGTGCGGAA GGTCAACGGC GGCCATTGGA TCGTCGTGAA GAAGCCCGCG
CTGATCGCCG AGCGGATCCG GGAGTTCGTC CAGTCCAGCA TCGCCACTCC AGGAGGACCT
GAGCCCGTGC GTTCCCTACT GCGTGCCGAG GCTAGGCAGG GCACTAAGGA CCGCCGTGAG
TTCGAGGACA AGCTGGTCGT CGTCACCGGC GCCGGTTCCG GTATCGGACG CGCCACCGCG
CTGGCGTTCG CCGAGAAGGG CGCGGACATC GTCGTTGCCG ACATCGACAG TGTCGCTGCC
GCGCGCACCG TAGAGCTGGT CGAACTGCTC GGTGCGCGCG GCTACCTCTA TACGGTCGAC
GTCTCCTCTG GCGAGGCCAT GGAGAAGTTC GCGAACGACG TTAAGGAGAC GGCGGGCGTT
CCCGACGTTG TCGTCAACAA CGCGGGCATC GGGATGTCCG GTCCCTTCCT CGCCACAGAG
GTGAAGGACT GGGAGAAGAT CCTCGGCGTC AACGTCTGGG GCGTCATCCA CGGCGCGCGC
TGTTTCGGCG CGATGATGCG GGAGCGCGGC GAGGGCGGGC ACATCGTGAA CCTCGCTTCC
GCCGCCGCCT ATACGCCGTC GCGCACTCTC TCTGCCTACT CGACGTCCAA GGCGGCCGTC
CTCATGCTCT CCGAATGCCT GCGCGCGGAG TTCGCGAGCT ACGGCATCGG CGTCTCGGCG
ATCTGCCCCG GCTTCATCGC CACCAACATC ACCCGGACGA CGAAGTTCGT CGGGCAGAGC
GCCGAGCAGC AGGAGCGGAC CCGGCAGCGG ATCACCGGCC TGTACCGGAA GCGGAACTTC
GGGCCCGACA AGGTGGCCGA GCGCATCGTC GACGCCGTGC GGCGGGACCG GCCGGTGGTC
CCGGTCGCGC TGGAGGCCAG GGCGGGCAAG GCCGTCTCCC GGCTGTCCCC GGCGCTGGCC
CGCCGGATGG CGAAGATCGA CCCGACCGGC TGA
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| Protein sequence | MTQDVRTLAV TVEGGKLSVR TYGDPSKPIV LLVHGYPDTQ AVWDGIVAEL VDDFYVVTYD
TRGIGASKGP LFKHGYTLEH LADDLYAVAD VVAPDRPVHL VGHDWGSIQA WEAVTRADSA
QRFLSYTSIS GPCLDHAALW TRSGIRKPTP KAAARSLKQA LASWYIVVFH LPVGPRVAWR
LGLAKQWPRI IKAIEGTRLD PSPTLHRDGS RGVLYYRANM LPKMRRPQER STTVPVQVLT
PTGDRFVTPA LAAQAPVPWT ERLYVRKVNG GHWIVVKKPA LIAERIREFV QSSIATPGGP
EPVRSLLRAE ARQGTKDRRE FEDKLVVVTG AGSGIGRATA LAFAEKGADI VVADIDSVAA
ARTVELVELL GARGYLYTVD VSSGEAMEKF ANDVKETAGV PDVVVNNAGI GMSGPFLATE
VKDWEKILGV NVWGVIHGAR CFGAMMRERG EGGHIVNLAS AAAYTPSRTL SAYSTSKAAV
LMLSECLRAE FASYGIGVSA ICPGFIATNI TRTTKFVGQS AEQQERTRQR ITGLYRKRNF
GPDKVAERIV DAVRRDRPVV PVALEARAGK AVSRLSPALA RRMAKIDPTG
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