| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2974 |
|---|
| Symbol | |
|---|
| ID | 9157142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3085706 |
|---|
| End bp | 3086635 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003647909 |
|---|
| Protein GI | 296140666 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTTC GCGATATCGT CCGGCTCGTC CACATGGCTC CGCCGATCAA GGACCTGAAG
GGGAAGAAGG TCCTCGTCAC CGGCGCTGCC AGTGGGATCG GGCGCGCTAC CGCGAATCTT
CTCGCGGCGC ACGGCGCCGA GCTCGTGTTG ACCGATATCA ACGCCGAGCA GCTCGACGCC
GTCACCCGCC ACGTCACCGC CCTGGGCGCC AAAGTCATCG CGTCCAGGGC GTTCGACGTC
TCCGATTACG ACGCGGTCGT CGCCTTCGCG GACGAGGTGC ACGCCGCGGT GGGCTCCCTC
GACATCGTGA TGAACATCGC CGGGATCTCG GTGTGGGGCA CCGTGCAGAA TCTGACCCAC
GAGCAGTGGC GCAAGACCGT CGACATCAAC CTCATGGGGC CGATCCACGT GATCGAGTCG
TTCGTGCCGC CGATGATCGC AGCGGGCCGC GGTGGACAAC TTGTCAACGT CGCCTCCGCC
GCAGGCCTGC TCGCCCTGCC CTGGCATTCG GCGTATTCCG CCGCCAAGTT CGGTCTGGTG
GGAGTTTCCG AGGTGCTGCG ATACGACCTG CGGCGCTACA ACATCGGCGT CAGTGTCGTG
TGTCCCGGTG CCGTACAGAC CGGGTTGGTC AAGACCGTCG AGATCAACGG GGTCGACCGC
ACCAATCCGA AGGTGAACGC GGGCATCGAC TCCTTCCCGA AGGTCTCCCC GGAGAAGGCG
GCCCGCGCCA TCATCGCGGG CGTGCTCAAG AACAAGTACC TCGTGTACAC CTCGTTCGAC
ACCCGATTCG GCTACTTCTG GAAGCAGAAG TTCGCGCCGC CCTACGAGAT CGCGATGCGG
ATCGCCAATG ACCGCTTCGC CTACCTGGCG AAGATCTCCG AACGCGGCCA GGCCGTCCCG
GCCGAGGAGC TCTCAGAGAG CGGTCAATAG
|
|---|
| Protein sequence | MALRDIVRLV HMAPPIKDLK GKKVLVTGAA SGIGRATANL LAAHGAELVL TDINAEQLDA
VTRHVTALGA KVIASRAFDV SDYDAVVAFA DEVHAAVGSL DIVMNIAGIS VWGTVQNLTH
EQWRKTVDIN LMGPIHVIES FVPPMIAAGR GGQLVNVASA AGLLALPWHS AYSAAKFGLV
GVSEVLRYDL RRYNIGVSVV CPGAVQTGLV KTVEINGVDR TNPKVNAGID SFPKVSPEKA
ARAIIAGVLK NKYLVYTSFD TRFGYFWKQK FAPPYEIAMR IANDRFAYLA KISERGQAVP
AEELSESGQ
|
|---|
| |