Gene Bphy_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1038 
Symbol 
ID6242536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1167566 
End bp1168435 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content66% 
IMG OID642592817 
Producthypothetical protein 
Protein accessionYP_001857273 
Protein GI186475803 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.357237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAT TCGACGGCAA GGTCGCGGTG ATAACAGGCG CGGGAAGCGG CTTTGGCCGT 
GCGTTTGCGG AGAAGGGCGC GTCGCTCGGC ATGAAGCTCG TGCTGGCGGA TGTCGACGAA
GGCGCGCTCG CACGAACTGT CGATACGTTG CGCGCAGCGG GCGCCGAGGT GATCGGCGTG
CGCACGGACG TGTCGAATGG CGCGCAGGTT CAGGCGCTCG CCGATGCGGC GCTCGAAGCG
TTCGGCAAGG TGCATCTGCT GTTCAACAAC GCGGGCGTCG GCGCCGGCGG CTTTCTATGG
GAAAGCTCGG CGAACGACTG GGCGTGGGTG TTCGGCGTCA ACGTGATGGG CGTCGCGCAC
GGCGTGCGCG TCTTCGCGCC CATCATGCTC GGGCAGAACG AAGCGGCGCA TATCGTCAAT
ACGGCGTCGG TGGCGGGCCT GCTGTCGCCG CCGTCGATGG GCATCTACAA CGCGTCGAAG
CATGCGGTGG TTTCGCTGAC CGAGACGCTG TATCACGACC TGCGCAATGC GGGCGGCGAG
GTGGGCTGTT CGCTGCTGTG TCCCGCGTTC GTGCCCACAG GTATCGCCGA CGCCGAACGC
GTGCGCCCCG AGGCGTTGCG CAACGAAGCG CAACCCACGC GCTCGCAGCT CGCCGCCGAC
AGGCAACTGC AGCGTGCAGT GCGGTCCGGC AAGTTGGGCG CGACCGACGT CGCGACGCTC
ACCTTCGAAG CGATCGCGGA ACGCCGCTTC TACATCCTCA CGCATCCCGC CATTCTCGCG
ACGGTGCGGC TTCGTCACGA GGACATCGAA CTGCAGCGCA ATCCGACCGA TCCGTTGTCG
CTGAAGCCCG AAGTCAAGGA AGCCCGCTAA
 
Protein sequence
MFEFDGKVAV ITGAGSGFGR AFAEKGASLG MKLVLADVDE GALARTVDTL RAAGAEVIGV 
RTDVSNGAQV QALADAALEA FGKVHLLFNN AGVGAGGFLW ESSANDWAWV FGVNVMGVAH
GVRVFAPIML GQNEAAHIVN TASVAGLLSP PSMGIYNASK HAVVSLTETL YHDLRNAGGE
VGCSLLCPAF VPTGIADAER VRPEALRNEA QPTRSQLAAD RQLQRAVRSG KLGATDVATL
TFEAIAERRF YILTHPAILA TVRLRHEDIE LQRNPTDPLS LKPEVKEAR