| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6402 |
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| Symbol | |
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| ID | 8362586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8044898 |
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| End bp | 8045731 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968530 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003126007 |
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| Protein GI | 256425354 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000182624 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACACTA TTATCACTAA CATGTATTTT GAAAATAAAG TAGTCTGGAT CATAGGCGCA
TCCTCCGGTA TAGGAGCCGC ACTGGCTAAA CAATTAGCCA GAGAAAAAGC ATTACTGATC
ATTACGGCAC GGAATATTGA CAAACTGCAA TCACTGGCTA ACGAACTTAC GCAGCTGACA
GCCTGCGTAG TGCTTCCGGC GGACATAGCC CGCCGGGACA CGCTACACAG TATAGTGGAA
GACTCTCTCC GGCAATTCGG GCATATCGAC ATCCTCATTC ACTCAGCTGG CATCGGACAA
CGTTCAATGG CAACAGGTAC CAGTCTCGCC GTCTATGACC AGCTCATGGA AGTCAATTTC
TTTGCCCCGC TGACAATCAC ACAATACCTC CTGCCCCACT TTAAACAAAG CGGTAAAGGA
CATATAGTAG CTGTCAGCAG CATGTCCGGA CTAATGGGTT TCCCCGGCCG CAGTGGATAT
GTGGCCTCCA AACACGCATT AAAAGGATAC TTTGAAACTT TGCAGGTAGA ACACGACATA
CCTGACTTTT ATATAACTAT TGTAAGCCCC GGCAGAATCA ATACTCCACT CCCCTTATCT
GCCCTCACGG CAGATGGTCA ACCTTACAAT AAAATGGATC ATGCACAACT CAATGGTATT
CCTGTGGAAA TATGTGCAGC TAAGATCTGT GGCGCCATCA TCCGCAAAAA GAAACACATC
TTCATCGCCA GAAAGGAGCG CTACCTCTAC TGGTTAAGAA TATTATTCCC CGCCGCCTAC
TACCACATCG CCAGAAAAGC AGGTGTAAAA GAACGTAACG AAGATACCGC CTGA
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| Protein sequence | MHTIITNMYF ENKVVWIIGA SSGIGAALAK QLAREKALLI ITARNIDKLQ SLANELTQLT
ACVVLPADIA RRDTLHSIVE DSLRQFGHID ILIHSAGIGQ RSMATGTSLA VYDQLMEVNF
FAPLTITQYL LPHFKQSGKG HIVAVSSMSG LMGFPGRSGY VASKHALKGY FETLQVEHDI
PDFYITIVSP GRINTPLPLS ALTADGQPYN KMDHAQLNGI PVEICAAKIC GAIIRKKKHI
FIARKERYLY WLRILFPAAY YHIARKAGVK ERNEDTA
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