Gene Tpau_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3139 
Symbol 
ID9157310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3248147 
End bp3248902 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content68% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003648065 
Protein GI296140822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.295469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGAAG TCGCCGTCGT CACTGGAGCG AGCAGTGGGA TCGGGGCCGC GACTGCGCGA 
CACCTCGTGC GCGCGGGATT CGACGTCGTG ATCGGGGCCC GCCGGCTCGA ACGCCTCGAA
GACCTCAAGG CGCAGCTGGA AGCCGAGTTC CCCGAGCGGA TCGTGACCGC GCTGCCGCTG
GATGTGACCG ACGTGGAGTC GGTGACGGCC TTCACCGACG CGATTCCCGC CGTCGACGTG
CTCGTCAACA ATGCCGGCGG CGCCATCGGC ACCGAGACGA TCGACGCTGC GCACGAAGCG
GACTGGCTGC GCATGTACGA CATCAACGTG CTGTCGATCC TGCGCGTCAC TCAGCGGTTG
CTGCCCAAGC TGCGGCAGTC ACCGTCGGCC AGCGTGGTGA CCATCGGCTC CATCGCCGCC
CACGAGGCCT ACGCCACGGG GGCCGGGTAC AACGCCGCGA AGTTCGGTGC GCGCGCCGTG
ACCCGCGCCC TGCGGCTCGA ACTCAAGGGC GAGCCGATCC GGGTGATCGA GATCGACCCC
GGGCTGGTCG AGACCGAGTT CTCGATCGTG CGGCTCCGCG GTGATGTGGA CGGGGCCGCC
AAGGTCTACG AGGGTGTCGA CAATCTGCAC GCCGACGACA TCGCCGACGC CGTCACGTGG
GCCGTGACCC GTCCCCCGCA CGTGAACATC GACAACATCA CGATCCTGGC GAGGGATCAG
GTGAGCGCCC GCGACGTGCA CCGCAGGAAC GTCTGA
 
Protein sequence
MSEVAVVTGA SSGIGAATAR HLVRAGFDVV IGARRLERLE DLKAQLEAEF PERIVTALPL 
DVTDVESVTA FTDAIPAVDV LVNNAGGAIG TETIDAAHEA DWLRMYDINV LSILRVTQRL
LPKLRQSPSA SVVTIGSIAA HEAYATGAGY NAAKFGARAV TRALRLELKG EPIRVIEIDP
GLVETEFSIV RLRGDVDGAA KVYEGVDNLH ADDIADAVTW AVTRPPHVNI DNITILARDQ
VSARDVHRRN V