Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3139 |
Symbol | |
ID | 9157310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3248147 |
End bp | 3248902 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003648065 |
Protein GI | 296140822 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.295469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTGAAG TCGCCGTCGT CACTGGAGCG AGCAGTGGGA TCGGGGCCGC GACTGCGCGA CACCTCGTGC GCGCGGGATT CGACGTCGTG ATCGGGGCCC GCCGGCTCGA ACGCCTCGAA GACCTCAAGG CGCAGCTGGA AGCCGAGTTC CCCGAGCGGA TCGTGACCGC GCTGCCGCTG GATGTGACCG ACGTGGAGTC GGTGACGGCC TTCACCGACG CGATTCCCGC CGTCGACGTG CTCGTCAACA ATGCCGGCGG CGCCATCGGC ACCGAGACGA TCGACGCTGC GCACGAAGCG GACTGGCTGC GCATGTACGA CATCAACGTG CTGTCGATCC TGCGCGTCAC TCAGCGGTTG CTGCCCAAGC TGCGGCAGTC ACCGTCGGCC AGCGTGGTGA CCATCGGCTC CATCGCCGCC CACGAGGCCT ACGCCACGGG GGCCGGGTAC AACGCCGCGA AGTTCGGTGC GCGCGCCGTG ACCCGCGCCC TGCGGCTCGA ACTCAAGGGC GAGCCGATCC GGGTGATCGA GATCGACCCC GGGCTGGTCG AGACCGAGTT CTCGATCGTG CGGCTCCGCG GTGATGTGGA CGGGGCCGCC AAGGTCTACG AGGGTGTCGA CAATCTGCAC GCCGACGACA TCGCCGACGC CGTCACGTGG GCCGTGACCC GTCCCCCGCA CGTGAACATC GACAACATCA CGATCCTGGC GAGGGATCAG GTGAGCGCCC GCGACGTGCA CCGCAGGAAC GTCTGA
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Protein sequence | MSEVAVVTGA SSGIGAATAR HLVRAGFDVV IGARRLERLE DLKAQLEAEF PERIVTALPL DVTDVESVTA FTDAIPAVDV LVNNAGGAIG TETIDAAHEA DWLRMYDINV LSILRVTQRL LPKLRQSPSA SVVTIGSIAA HEAYATGAGY NAAKFGARAV TRALRLELKG EPIRVIEIDP GLVETEFSIV RLRGDVDGAA KVYEGVDNLH ADDIADAVTW AVTRPPHVNI DNITILARDQ VSARDVHRRN V
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