Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3522 |
Symbol | |
ID | 4256268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4168930 |
End bp | 4169607 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638124206 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_739559 |
Protein GI | 114049009 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACTGA TTACTGGCGC AAGCAGTGGC TTAGGCGCGG CATTAGCCGC CCTGTATGCC AAGGATAACC AAGCGCTTAC ACTGACGGGG CGCGATGCCA ATCGCCTGCA TACCGTGGCC AATGCCCTCA GCCCATTTTC GACCCAAAGC ATCAGCGCCA TTAGTGCCGA TTTAGCGGAC GAAGCGAGTG TCGAAGCGCT ATTCGATGGT CTCACCGATA CCCCCAACAC GGTCATCCAC TGCGCTGGCA GTGGTTACTT TGGCGCACTG GAAACCCAAG GCACAAGTGA GATCCAAGCG CTGCTGAATA ACAATGTCAC GTCAACCATT CTGCTGGTAC GTGAATTGGT GAAACGCTAT AAGCAACAAG CAGTTAAGGT TGTGGTCGTG ATGTCTACCG CCGCCCTCGC CGCCAAAGCG GGTGAGTCGA CTTACTGCGC CGCCAAATGG GCGGTAAGGG GCTTTATCGA ATCGGTACGT TTGGAGCTCA AACAGAGTCA GATGAAGTTG ATTGCGGTTT ATCCCGGCGG TATGGATACC GGCTTTTGGC CGAGTAGTGG TAAGAGTCTA GATACCTCAA GCTTTATGTC CGCCGATGAG GCCGCAAGCA TGCTAAAACA AGCACTGCTC GCCACTGAAC ATGGTTATAT CGCCGATATC ACCATACAAA GAGGTTAA
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Protein sequence | MILITGASSG LGAALAALYA KDNQALTLTG RDANRLHTVA NALSPFSTQS ISAISADLAD EASVEALFDG LTDTPNTVIH CAGSGYFGAL ETQGTSEIQA LLNNNVTSTI LLVRELVKRY KQQAVKVVVV MSTAALAAKA GESTYCAAKW AVRGFIESVR LELKQSQMKL IAVYPGGMDT GFWPSSGKSL DTSSFMSADE AASMLKQALL ATEHGYIADI TIQRG
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