| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2370 |
|---|
| Symbol | |
|---|
| ID | 6355841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 2597302 |
|---|
| End bp | 2598063 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642669962 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001944372 |
|---|
| Protein GI | 189347843 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTAA CGTATCAACG CATAGCAATC GTGACCGGAG CCACCTCCGG TATCGGAGAG
GCGACGGCGC GCCTGTTCGC GGCTTCCGGT TACGGAGTCG TGGGTGCCGG GCGCAATGCG
GAAAAACTGG CCGAACTTGA AGACGAGATC GGCAGGGCAT TCTGCGGGGT TGCCGGAGAT
GCCTCCGATG AGGAGGTGAT CGACCGGTTG TTCTCTGACG CCCTTGAACG GTTCGGCAGC
GATGCCGACA TCGTAGTGGC CAACGCAGGC CGGGGACTTG GCGGGTCGGT GAAGGATGCC
GATCTTCGGG AGTTCCGGGA GGTGCTCGAC ATTAACGTGA GCGGAGCGCT GCTGCTGCTG
CAGAAAGCTG CCCGCAGGAT GGTGGTTATG CAGGATGGGC GCTTTCCTGA AAACGCTGCG
GATATCGTCG TTGTGGGTTC AACCGTCGGA CGTCAGATTT CGCCCTTTAG CGCGGTGTAT
GGCGCTACGA AATTCGCTGT GCATTCGCTT GCCGAAGGGC TCCGGCGCGA AATCGGGCCA
AAAGGCGTGC GTGTTTCGCT GGTGGAGCCG GGCATCGTGG TGAGCGGGTT TCAGTCGGTG
GCGGGCTATA CCGACGATCT GGTCAATACC TTTCACGACC GGTTCGGTCC GCTTCTTTTC
GGAGAGGATG TGGCCCGGGC GATTCACGGG ATCGTATCGC AGCCGCCGCA TGTGCATTTC
AGCGATGTAG TGGTGAGGCC GACACGCCAG GATTATCCCT AA
|
|---|
| Protein sequence | MSVTYQRIAI VTGATSGIGE ATARLFAASG YGVVGAGRNA EKLAELEDEI GRAFCGVAGD
ASDEEVIDRL FSDALERFGS DADIVVANAG RGLGGSVKDA DLREFREVLD INVSGALLLL
QKAARRMVVM QDGRFPENAA DIVVVGSTVG RQISPFSAVY GATKFAVHSL AEGLRREIGP
KGVRVSLVEP GIVVSGFQSV AGYTDDLVNT FHDRFGPLLF GEDVARAIHG IVSQPPHVHF
SDVVVRPTRQ DYP
|
|---|
| |