Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3687 |
Symbol | |
ID | 4479888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4426470 |
End bp | 4427201 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639728292 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_871312 |
Protein GI | 117922120 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAC CCACTCAGCC CCTCGTTGTG ATCACTGGCG CCTCATCGGG CATAGGTGCC GCCATCGCTA AACAATTTAG CGCCGCAGGA CACCCGCTAT TACTACTGGC ACGCCGTGTA GAGCCAATGC AAGCCCTTGA GTTACCCAAT AGCCTAGCGA TAGGCGTCGA TGTGACAGAC ACAGACGCCA TCAAGGCCGC CATTAACCAA GCGGAAGCAC AGTTTGGCCC AGTCGGTTGC CTTATCAACA ACGCCGGCGT CATGTTGCTT GGGCAAATCG ATACCCAAGA TCCCAACGAA TGGAGCCGCA TGCTCAATAT CAATGTGATG GGCGTACTCA ATGGTATCCA TGCGGTTTTA GCCGGAATGA AGGCGCGCAA AACGGGCACC ATTATCAATA TCAGCTCAGT GGCGGGACGT AAGACCTTCC CCAACCATGC GGCTTATTGC GCGACAAAAT TTGCCGTGCA TGCCTTAACC GAAAACATCC GCGAAGAAGT CGCAATGGAC GATGTACGCC TGATCACCAT AGCGCCGGGA GCGGTCGAGA CAGAACTCTT AAGCCACACC ACGGATGATG CTATCAAAGC TGGCTACCAA GATTGGAAAG TACAAATGGG CGGCGTGATT GCCCCCGAAA ACGTTGCCGC TGCAGCATTA TTTGCTTGGC AACAACCGCA AAATGTCTGT GTGCGTGAGA TAGTGTTAGC GCCGACACGC CAGCAACCTT AA
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Protein sequence | MTKPTQPLVV ITGASSGIGA AIAKQFSAAG HPLLLLARRV EPMQALELPN SLAIGVDVTD TDAIKAAINQ AEAQFGPVGC LINNAGVMLL GQIDTQDPNE WSRMLNINVM GVLNGIHAVL AGMKARKTGT IINISSVAGR KTFPNHAAYC ATKFAVHALT ENIREEVAMD DVRLITIAPG AVETELLSHT TDDAIKAGYQ DWKVQMGGVI APENVAAAAL FAWQQPQNVC VREIVLAPTR QQP
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