Gene Shewana3_3687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3687 
Symbol 
ID4479888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4426470 
End bp4427201 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content53% 
IMG OID639728292 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_871312 
Protein GI117922120 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC CCACTCAGCC CCTCGTTGTG ATCACTGGCG CCTCATCGGG CATAGGTGCC 
GCCATCGCTA AACAATTTAG CGCCGCAGGA CACCCGCTAT TACTACTGGC ACGCCGTGTA
GAGCCAATGC AAGCCCTTGA GTTACCCAAT AGCCTAGCGA TAGGCGTCGA TGTGACAGAC
ACAGACGCCA TCAAGGCCGC CATTAACCAA GCGGAAGCAC AGTTTGGCCC AGTCGGTTGC
CTTATCAACA ACGCCGGCGT CATGTTGCTT GGGCAAATCG ATACCCAAGA TCCCAACGAA
TGGAGCCGCA TGCTCAATAT CAATGTGATG GGCGTACTCA ATGGTATCCA TGCGGTTTTA
GCCGGAATGA AGGCGCGCAA AACGGGCACC ATTATCAATA TCAGCTCAGT GGCGGGACGT
AAGACCTTCC CCAACCATGC GGCTTATTGC GCGACAAAAT TTGCCGTGCA TGCCTTAACC
GAAAACATCC GCGAAGAAGT CGCAATGGAC GATGTACGCC TGATCACCAT AGCGCCGGGA
GCGGTCGAGA CAGAACTCTT AAGCCACACC ACGGATGATG CTATCAAAGC TGGCTACCAA
GATTGGAAAG TACAAATGGG CGGCGTGATT GCCCCCGAAA ACGTTGCCGC TGCAGCATTA
TTTGCTTGGC AACAACCGCA AAATGTCTGT GTGCGTGAGA TAGTGTTAGC GCCGACACGC
CAGCAACCTT AA
 
Protein sequence
MTKPTQPLVV ITGASSGIGA AIAKQFSAAG HPLLLLARRV EPMQALELPN SLAIGVDVTD 
TDAIKAAINQ AEAQFGPVGC LINNAGVMLL GQIDTQDPNE WSRMLNINVM GVLNGIHAVL
AGMKARKTGT IINISSVAGR KTFPNHAAYC ATKFAVHALT ENIREEVAMD DVRLITIAPG
AVETELLSHT TDDAIKAGYQ DWKVQMGGVI APENVAAAAL FAWQQPQNVC VREIVLAPTR
QQP