More than 300 homologs were found in PanDaTox collection
for query gene Shewmr4_0509 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008321  Shewmr4_0509  short-chain dehydrogenase/reductase SDR  100 
 
 
225 aa  457  9.999999999999999e-129  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3522  short-chain dehydrogenase/reductase SDR  100 
 
 
225 aa  457  9.999999999999999e-129  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0509  short-chain dehydrogenase/reductase SDR  97.78 
 
 
225 aa  421  1e-117  Shewanella sp. ANA-3  Bacteria  normal  0.832516  normal 
 
 
-
 
NC_011663  Sbal223_3800  short-chain dehydrogenase/reductase SDR  86.61 
 
 
225 aa  401  1e-111  Shewanella baltica OS223  Bacteria  hitchhiker  0.0000125845  normal 
 
 
-
 
NC_004347  SO_0510  short chain dehydrogenase/reductase family oxidoreductase  92 
 
 
225 aa  399  9.999999999999999e-111  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_3982  short-chain dehydrogenase/reductase SDR  85.71 
 
 
225 aa  398  9.999999999999999e-111  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3856  short-chain dehydrogenase/reductase SDR  85.71 
 
 
225 aa  396  1e-109  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0468  short-chain dehydrogenase/reductase SDR  85.71 
 
 
225 aa  388  1e-107  Shewanella baltica OS155  Bacteria  decreased coverage  0.00000583805  n/a   
 
 
-
 
NC_009438  Sputcn32_3349  short-chain dehydrogenase/reductase SDR  81.78 
 
 
225 aa  360  1e-98  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2183  putative short-chain dehydrogenase  67.56 
 
 
221 aa  309  2e-83  Shewanella sediminis HAW-EB3  Bacteria  normal  0.766621  normal 
 
 
-
 
NC_009901  Spea_0532  short-chain dehydrogenase/reductase SDR  66.67 
 
 
220 aa  297  7e-80  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00000466004  n/a   
 
 
-
 
NC_009092  Shew_0706  short-chain dehydrogenase/reductase SDR  65.22 
 
 
225 aa  288  7e-77  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2454  short-chain dehydrogenase/reductase SDR  60.44 
 
 
225 aa  277  7e-74  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1876  short-chain dehydrogenase/reductase SDR  61.33 
 
 
226 aa  253  2.0000000000000002e-66  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03631  hypothetical protein  58.48 
 
 
221 aa  251  8.000000000000001e-66  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002433  putative short-chain dehydrogenase  54.46 
 
 
221 aa  239  2.9999999999999997e-62  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3280  short-chain dehydrogenase/reductase SDR  32.35 
 
 
232 aa  93.2  3e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.798057  normal 
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  31.32 
 
 
286 aa  87.8  1e-16  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_008148  Rxyl_3000  short-chain dehydrogenase/reductase SDR  31.48 
 
 
241 aa  88.2  1e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1596  short chain dehydrogenase  28.95 
 
 
245 aa  86.7  3e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.184756 
 
 
-
 
NC_007777  Francci3_0348  short-chain dehydrogenase/reductase SDR  27.63 
 
 
280 aa  85.9  4e-16  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_6051  short chain dehydrogenase  28 
 
 
221 aa  85.9  4e-16  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0202908  normal  0.993323 
 
 
-
 
NC_009338  Mflv_0854  short chain dehydrogenase  28.44 
 
 
225 aa  85.5  5e-16  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0159157 
 
 
-
 
NC_012560  Avin_18610  short chain dehydrogenase  34.22 
 
 
263 aa  84.7  0.000000000000001  Azotobacter vinelandii DJ  Bacteria  normal  0.56588  n/a   
 
 
-
 
NC_010506  Swoo_1668  short-chain dehydrogenase/reductase SDR  32.61 
 
 
251 aa  84.7  0.000000000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2666  short chain dehydrogenase  32.97 
 
 
265 aa  83.6  0.000000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.144956  normal 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  29.29 
 
 
263 aa  82.8  0.000000000000004  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_0075  3-oxoacyl-[acyl-carrier protein] reductase  31.28 
 
 
212 aa  82.8  0.000000000000004  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0416  short-chain alcohol dehydrogenase  29.52 
 
 
235 aa  82.8  0.000000000000004  Bifidobacterium longum DJO10A  Bacteria  normal  0.279959  n/a   
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  32.27 
 
 
272 aa  82.4  0.000000000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  29.29 
 
 
321 aa  82  0.000000000000006  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1064  short chain dehydrogenase/reductase family oxidoreductase  29.02 
 
 
252 aa  80.9  0.00000000000001  Staphylococcus epidermidis RP62A  Bacteria  normal  0.630336  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  33.88 
 
 
279 aa  81.3  0.00000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_007575  Suden_1903  Short-chain dehydrogenase/reductase SDR  31.25 
 
 
242 aa  81.3  0.00000000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0749  short-chain dehydrogenase/reductase SDR  30.88 
 
 
261 aa  81.3  0.00000000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_0363  short-chain dehydrogenase/reductase SDR  32.84 
 
 
281 aa  80.1  0.00000000000002  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0964  short-chain dehydrogenase/reductase SDR  27.75 
 
 
227 aa  80.1  0.00000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.0180181  normal  0.277757 
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  27.27 
 
 
238 aa  79.7  0.00000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_008009  Acid345_2206  short-chain dehydrogenase/reductase SDR  28.19 
 
 
261 aa  79.3  0.00000000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0587036  normal  0.882414 
 
 
-
 
NC_013730  Slin_4558  short-chain dehydrogenase/reductase SDR  31.75 
 
 
240 aa  79  0.00000000000006  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00293136  normal 
 
 
-
 
NC_013132  Cpin_4835  short-chain dehydrogenase/reductase SDR  27.42 
 
 
273 aa  78.6  0.00000000000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.000000227026 
 
 
-
 
NC_009092  Shew_3415  short chain dehydrogenase  27.03 
 
 
268 aa  78.6  0.00000000000007  Shewanella loihica PV-4  Bacteria  normal  0.560569  normal 
 
 
-
 
NC_013131  Caci_5627  short-chain dehydrogenase/reductase SDR  32.79 
 
 
282 aa  78.6  0.00000000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.193827 
 
 
-
 
NC_013159  Svir_39280  short chain dehydrogenase  26.43 
 
 
230 aa  78.6  0.00000000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010627  Bphy_7637  short-chain dehydrogenase/reductase SDR  24.07 
 
 
251 aa  78.6  0.00000000000008  Burkholderia phymatum STM815  Bacteria  normal  normal  0.897824 
 
 
-
 
NC_011831  Cagg_0016  short-chain dehydrogenase/reductase SDR  32.07 
 
 
231 aa  78.2  0.00000000000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0194  short-chain dehydrogenase/reductase SDR  28.77 
 
 
233 aa  78.2  0.0000000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  30.98 
 
 
275 aa  77.8  0.0000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_007413  Ava_4667  Short-chain dehydrogenase/reductase SDR  27.47 
 
 
234 aa  77.8  0.0000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_0731  short chain dehydrogenase  28 
 
 
235 aa  77.4  0.0000000000001  Synechococcus sp. CC9605  Bacteria  normal  0.510402  normal 
 
 
-
 
NC_008312  Tery_3313  short-chain dehydrogenase/reductase SDR  30.89 
 
 
281 aa  78.2  0.0000000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  0.320524  normal  0.08809 
 
 
-
 
NC_008701  Pisl_1529  short-chain dehydrogenase/reductase SDR  31.49 
 
 
265 aa  78.2  0.0000000000001  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.0206025  normal  0.910086 
 
 
-
 
NC_009972  Haur_2654  short-chain dehydrogenase/reductase SDR  28.42 
 
 
241 aa  77  0.0000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2442  putative short-chain dehydrogenase  26.32 
 
 
231 aa  77  0.0000000000002  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.198493 
 
 
-
 
NC_012793  GWCH70_1182  3-ketoacyl-(acyl-carrier-protein) reductase  28.89 
 
 
238 aa  77  0.0000000000002  Geobacillus sp. WCH70  Bacteria  normal  0.049347  n/a   
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  29.2 
 
 
262 aa  77.4  0.0000000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_008312  Tery_3927  short-chain dehydrogenase/reductase SDR  25.99 
 
 
235 aa  77  0.0000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0764891  hitchhiker  0.00221105 
 
 
-
 
NC_011726  PCC8801_4281  short-chain dehydrogenase/reductase SDR  24.78 
 
 
236 aa  76.6  0.0000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp1382  hypothetical protein  28.87 
 
 
259 aa  76.3  0.0000000000003  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  31.22 
 
 
269 aa  76.6  0.0000000000003  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  29.08 
 
 
264 aa  76.6  0.0000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  28.32 
 
 
263 aa  76.3  0.0000000000003  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  28.65 
 
 
267 aa  76.3  0.0000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_013440  Hoch_4638  short-chain dehydrogenase/reductase SDR  29.82 
 
 
238 aa  76.6  0.0000000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0865823  normal 
 
 
-
 
NC_013161  Cyan8802_4341  short-chain dehydrogenase/reductase SDR  24.78 
 
 
236 aa  76.6  0.0000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  0.157663  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  28 
 
 
265 aa  75.9  0.0000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_008146  Mmcs_0423  short-chain dehydrogenase/reductase SDR  29.26 
 
 
291 aa  75.9  0.0000000000005  Mycobacterium sp. MCS  Bacteria  normal  0.389698  n/a   
 
 
-
 
NC_008705  Mkms_0433  short-chain dehydrogenase/reductase SDR  29.26 
 
 
291 aa  75.9  0.0000000000005  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0648553 
 
 
-
 
NC_009077  Mjls_0410  short-chain dehydrogenase/reductase SDR  29.26 
 
 
291 aa  75.9  0.0000000000005  Mycobacterium sp. JLS  Bacteria  normal  normal  0.526015 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  30.54 
 
 
262 aa  75.5  0.0000000000006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  28.76 
 
 
262 aa  75.5  0.0000000000006  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_013205  Aaci_2186  3-ketoacyl-(acyl-carrier-protein) reductase  25.94 
 
 
241 aa  75.5  0.0000000000007  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl1378  hypothetical protein  28.87 
 
 
259 aa  75.5  0.0000000000007  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007514  Cag_0693  sepiapterin reductase  24.46 
 
 
241 aa  75.5  0.0000000000007  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.101959  n/a   
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  28.12 
 
 
264 aa  75.1  0.0000000000008  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_008699  Noca_2840  short chain dehydrogenase  29.57 
 
 
302 aa  75.1  0.0000000000008  Nocardioides sp. JS614  Bacteria  normal  0.28747  n/a   
 
 
-
 
NC_010803  Clim_2370  short-chain dehydrogenase/reductase SDR  22.82 
 
 
253 aa  75.1  0.0000000000009  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0292  short chain dehydrogenase  32.12 
 
 
260 aa  75.1  0.0000000000009  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_4202  short-chain dehydrogenase/reductase SDR  28.35 
 
 
344 aa  74.7  0.000000000001  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  28.12 
 
 
266 aa  74.3  0.000000000001  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3871  Short-chain dehydrogenase/reductase SDR  29.03 
 
 
263 aa  74.3  0.000000000001  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  30.09 
 
 
264 aa  74.7  0.000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_012880  Dd703_3945  short-chain dehydrogenase/reductase SDR  31.49 
 
 
264 aa  74.3  0.000000000001  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  27.89 
 
 
264 aa  74.7  0.000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  28.12 
 
 
269 aa  74.3  0.000000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_013093  Amir_7025  short chain dehydrogenase  27.63 
 
 
229 aa  74.7  0.000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0604  short-chain dehydrogenase/reductase SDR  29.9 
 
 
268 aa  74.7  0.000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.710903  normal  0.301955 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  30.54 
 
 
262 aa  74.3  0.000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  28.38 
 
 
264 aa  73.9  0.000000000002  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1178  Short-chain dehydrogenase/reductase SDR  30.98 
 
 
286 aa  73.9  0.000000000002  Burkholderia sp. 383  Bacteria  normal  normal  0.0954699 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  29.49 
 
 
260 aa  73.9  0.000000000002  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0733  short-chain dehydrogenase/reductase SDR  25.64 
 
 
243 aa  73.6  0.000000000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0252  short-chain dehydrogenase/reductase SDR  27.98 
 
 
281 aa  73.6  0.000000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  28.57 
 
 
270 aa  73.9  0.000000000002  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  30.57 
 
 
269 aa  73.9  0.000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_011757  Mchl_0767  short-chain dehydrogenase/reductase SDR  29.67 
 
 
330 aa  73.6  0.000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.415615 
 
 
-
 
NC_009511  Swit_3073  3-ketoacyl-(acyl-carrier-protein) reductase  29.28 
 
 
250 aa  73.9  0.000000000002  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2291  short chain dehydrogenase/reductase family oxidoreductase  29.82 
 
 
262 aa  73.2  0.000000000003  Burkholderia mallei ATCC 23344  Bacteria  normal  0.448302  n/a   
 
 
-
 
NC_009523  RoseRS_0388  short-chain dehydrogenase/reductase SDR  28.21 
 
 
269 aa  73.2  0.000000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.14599 
 
 
-
 
NC_009523  RoseRS_3145  short-chain dehydrogenase/reductase SDR  30.65 
 
 
535 aa  73.2  0.000000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.61705 
 
 
-
 
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