More than 300 homologs were found in PanDaTox collection
for query gene Shew_3415 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_3415  short chain dehydrogenase  100 
 
 
268 aa  545  1e-154  Shewanella loihica PV-4  Bacteria  normal  0.560569  normal 
 
 
-
 
NC_011663  Sbal223_3844  short chain dehydrogenase  75 
 
 
267 aa  408  1e-113  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000447473 
 
 
-
 
NC_009052  Sbal_0416  short chain dehydrogenase  75 
 
 
267 aa  408  1e-113  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4040  short chain dehydrogenase  75 
 
 
267 aa  408  1e-113  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3918  short chain dehydrogenase  74.63 
 
 
267 aa  407  1.0000000000000001e-112  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3588  short chain dehydrogenase  75 
 
 
267 aa  406  1.0000000000000001e-112  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0437  short chain dehydrogenase  74.63 
 
 
267 aa  405  1.0000000000000001e-112  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0441  short chain dehydrogenase  74.25 
 
 
267 aa  403  1e-111  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0438  short chain dehydrogenase  73.51 
 
 
267 aa  399  9.999999999999999e-111  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_0429  short chain dehydrogenase  71.16 
 
 
267 aa  393  1e-108  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3404  short chain dehydrogenase  70.15 
 
 
267 aa  384  1e-106  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0293  short chain dehydrogenase  66.79 
 
 
267 aa  384  1e-105  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0389  short chain dehydrogenase  71.11 
 
 
270 aa  383  1e-105  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  47.55 
 
 
269 aa  249  3e-65  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  46.97 
 
 
269 aa  238  5e-62  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_007948  Bpro_3168  short chain dehydrogenase  41.06 
 
 
270 aa  201  7e-51  Polaromonas sp. JS666  Bacteria  normal  0.273274  normal  0.685188 
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  39.69 
 
 
269 aa  197  2.0000000000000003e-49  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_013061  Phep_3027  short-chain dehydrogenase/reductase SDR  39 
 
 
272 aa  195  7e-49  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00333155 
 
 
-
 
NC_007347  Reut_A1414  short chain dehydrogenase  41.51 
 
 
270 aa  194  9e-49  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_2951  short chain dehydrogenase  40.84 
 
 
276 aa  188  7e-47  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  39.85 
 
 
266 aa  187  2e-46  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  37.4 
 
 
266 aa  184  1.0000000000000001e-45  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_011693  PHATRDRAFT_16295  predicted protein  41.38 
 
 
237 aa  181  1e-44  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0303319  n/a   
 
 
-
 
NC_009439  Pmen_3735  short chain dehydrogenase  40.08 
 
 
281 aa  167  2e-40  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6402  short-chain dehydrogenase/reductase SDR  35.25 
 
 
277 aa  159  7e-38  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000182624  normal 
 
 
-
 
NC_008463  PA14_12680  short chain dehydrogenase  37.31 
 
 
278 aa  151  8.999999999999999e-36  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0379  short-chain dehydrogenase/reductase SDR  30.27 
 
 
262 aa  143  2e-33  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  45.27 
 
 
257 aa  141  9.999999999999999e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_010571  Oter_1684  short-chain dehydrogenase/reductase SDR  35.66 
 
 
263 aa  140  1.9999999999999998e-32  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0208  short-chain dehydrogenase/reductase SDR  33.72 
 
 
263 aa  139  3.9999999999999997e-32  Spirosoma linguale DSM 74  Bacteria  normal  0.196422  normal 
 
 
-
 
NC_009441  Fjoh_5037  3-ketoacyl-(acyl-carrier-protein) reductase  32.37 
 
 
238 aa  135  6.0000000000000005e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  0.293143  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  32.13 
 
 
264 aa  127  1.0000000000000001e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  32.85 
 
 
264 aa  125  6e-28  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  31.77 
 
 
264 aa  125  9e-28  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  31.41 
 
 
264 aa  125  1e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  31.41 
 
 
264 aa  125  1e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  31.41 
 
 
264 aa  125  1e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2044  3-ketoacyl-(acyl-carrier-protein) reductase  33.2 
 
 
242 aa  124  2e-27  Bacillus cereus ATCC 10987  Bacteria  normal  0.252391  n/a   
 
 
-
 
NC_011772  BCG9842_B3364  3-ketoacyl-(acyl-carrier-protein) reductase  33.2 
 
 
239 aa  124  2e-27  Bacillus cereus G9842  Bacteria  normal  0.115947  hitchhiker  0.00000000000000894376 
 
 
-
 
NC_011725  BCB4264_A1964  3-ketoacyl-(acyl-carrier-protein) reductase  33.2 
 
 
239 aa  124  2e-27  Bacillus cereus B4264  Bacteria  normal  0.130885  n/a   
 
 
-
 
NC_005945  BAS1819  3-ketoacyl-(acyl-carrier-protein) reductase  33.2 
 
 
242 aa  124  2e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1793  3-ketoacyl-(acyl-carrier-protein) reductase  33.2 
 
 
242 aa  124  2e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.512815  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  30.43 
 
 
264 aa  124  2e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1775  3-ketoacyl-(acyl-carrier-protein) reductase  33.2 
 
 
242 aa  124  2e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1995  3-ketoacyl-(acyl-carrier-protein) reductase  33.2 
 
 
239 aa  124  2e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.591310000000001e-44 
 
 
-
 
NC_007530  GBAA_1958  3-ketoacyl-(acyl-carrier-protein) reductase  33.2 
 
 
242 aa  124  2e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0245  short-chain dehydrogenase/reductase SDR  33.33 
 
 
272 aa  124  2e-27  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.25903 
 
 
-
 
NC_011679  PHATR_36881  2-deoxy-D-gluconate 3-dehydrogenase  33.09 
 
 
308 aa  124  2e-27  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.804236  n/a   
 
 
-
 
NC_011658  BCAH187_A2065  3-ketoacyl-(acyl-carrier-protein) reductase  33.2 
 
 
239 aa  124  2e-27  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000861938  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  32.48 
 
 
264 aa  124  2e-27  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  32.48 
 
 
264 aa  123  3e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1826  3-ketoacyl-(acyl-carrier-protein) reductase  33.2 
 
 
239 aa  123  3e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  30.43 
 
 
264 aa  123  3e-27  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009674  Bcer98_1494  3-ketoacyl-(acyl-carrier-protein) reductase  32.79 
 
 
239 aa  123  3e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000128809  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  32.13 
 
 
264 aa  123  4e-27  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_009767  Rcas_3908  short-chain dehydrogenase/reductase SDR  33.85 
 
 
272 aa  122  5e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.106718  normal  0.186536 
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  33.33 
 
 
275 aa  121  9e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_007969  Pcryo_2430  short-chain dehydrogenase/reductase SDR  31.03 
 
 
274 aa  120  1.9999999999999998e-26  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1352  short-chain dehydrogenase/reductase SDR  33.59 
 
 
272 aa  119  4.9999999999999996e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.15703  normal 
 
 
-
 
NC_011661  Dtur_0425  short-chain dehydrogenase/reductase SDR  33.18 
 
 
241 aa  119  6e-26  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.116852  n/a   
 
 
-
 
NC_010172  Mext_1014  short-chain dehydrogenase/reductase SDR  34.48 
 
 
336 aa  117  9.999999999999999e-26  Methylobacterium extorquens PA1  Bacteria  normal  0.264982  normal 
 
 
-
 
NC_011757  Mchl_0762  short-chain dehydrogenase/reductase SDR  34.48 
 
 
336 aa  118  9.999999999999999e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1302  short-chain dehydrogenase/reductase SDR  35.91 
 
 
258 aa  117  9.999999999999999e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.12307  hitchhiker  0.00977234 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  39.04 
 
 
258 aa  117  1.9999999999999998e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1326  short-chain dehydrogenase/reductase SDR  34.48 
 
 
336 aa  117  1.9999999999999998e-25  Methylobacterium populi BJ001  Bacteria  normal  0.945072  normal  0.131603 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  31.06 
 
 
264 aa  115  7.999999999999999e-25  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  35.35 
 
 
261 aa  115  8.999999999999998e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013757  Gobs_3408  short-chain dehydrogenase/reductase SDR  35.86 
 
 
330 aa  114  1.0000000000000001e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  30.67 
 
 
238 aa  115  1.0000000000000001e-24  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  35.09 
 
 
281 aa  114  1.0000000000000001e-24  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3255  short-chain dehydrogenase/reductase SDR  30.42 
 
 
262 aa  114  1.0000000000000001e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.207826 
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  32.72 
 
 
262 aa  113  3e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010505  Mrad2831_5141  short-chain dehydrogenase/reductase SDR  32.71 
 
 
337 aa  113  3e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.460239  normal 
 
 
-
 
NC_011894  Mnod_7667  short-chain dehydrogenase/reductase SDR  30.27 
 
 
332 aa  113  4.0000000000000004e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.755346  n/a   
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  33.65 
 
 
255 aa  112  6e-24  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_007614  Nmul_A1489  short chain dehydrogenase  32.45 
 
 
296 aa  112  6e-24  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_4049  3-ketoacyl-(acyl-carrier-protein) reductase  31.51 
 
 
238 aa  112  7.000000000000001e-24  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2368  short-chain dehydrogenase/reductase SDR  31.76 
 
 
274 aa  112  7.000000000000001e-24  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.448097 
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  35.37 
 
 
249 aa  112  7.000000000000001e-24  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_013743  Htur_2906  short-chain dehydrogenase/reductase SDR  36.7 
 
 
258 aa  112  8.000000000000001e-24  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  34.18 
 
 
236 aa  112  8.000000000000001e-24  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  31.75 
 
 
295 aa  112  9e-24  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_010511  M446_1056  short-chain dehydrogenase/reductase SDR  35.11 
 
 
332 aa  111  1.0000000000000001e-23  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.843879 
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  30.34 
 
 
308 aa  111  1.0000000000000001e-23  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  32.59 
 
 
286 aa  111  1.0000000000000001e-23  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  30.34 
 
 
308 aa  111  1.0000000000000001e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  30.34 
 
 
308 aa  111  1.0000000000000001e-23  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  34.6 
 
 
259 aa  111  1.0000000000000001e-23  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_013743  Htur_3538  short-chain dehydrogenase/reductase SDR  33.19 
 
 
248 aa  111  1.0000000000000001e-23  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  31.32 
 
 
315 aa  111  1.0000000000000001e-23  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_010803  Clim_0189  short-chain dehydrogenase/reductase SDR  37.44 
 
 
267 aa  111  1.0000000000000001e-23  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00000709968  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  30.34 
 
 
308 aa  111  1.0000000000000001e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2194  short-chain dehydrogenase/reductase SDR  30.77 
 
 
280 aa  111  1.0000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0155651  n/a   
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  34.38 
 
 
267 aa  111  1.0000000000000001e-23  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  30.34 
 
 
308 aa  111  1.0000000000000001e-23  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  29.1 
 
 
293 aa  110  2.0000000000000002e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  34.57 
 
 
258 aa  110  2.0000000000000002e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_009621  Smed_5220  short-chain dehydrogenase/reductase SDR  36.36 
 
 
279 aa  110  2.0000000000000002e-23  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3000  short-chain dehydrogenase/reductase SDR  39.38 
 
 
241 aa  110  2.0000000000000002e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11068  oxidoreductase  35.48 
 
 
301 aa  110  3e-23  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.205536 
 
 
-
 
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