More than 300 homologs were found in PanDaTox collection
for query gene SERP1064 on replicon NC_002976
Organism: Staphylococcus epidermidis RP62A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002976  SERP1064  short chain dehydrogenase/reductase family oxidoreductase  100 
 
 
252 aa  520  1e-147  Staphylococcus epidermidis RP62A  Bacteria  normal  0.630336  n/a   
 
 
-
 
NC_009632  SaurJH1_1590  short-chain dehydrogenase/reductase SDR  55.16 
 
 
251 aa  287  1e-76  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.691332  n/a   
 
 
-
 
NC_009487  SaurJH9_1559  short-chain dehydrogenase/reductase SDR  55.16 
 
 
251 aa  287  1e-76  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  31.35 
 
 
264 aa  121  8e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  31.35 
 
 
264 aa  121  8e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  31.35 
 
 
264 aa  121  8e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  30.95 
 
 
264 aa  121  9.999999999999999e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  31.35 
 
 
264 aa  120  1.9999999999999998e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  31.35 
 
 
264 aa  120  3e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  31.35 
 
 
264 aa  120  3e-26  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  30.95 
 
 
264 aa  119  4.9999999999999996e-26  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  30.95 
 
 
264 aa  118  9e-26  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  30.56 
 
 
264 aa  115  5e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  27.97 
 
 
262 aa  115  6.9999999999999995e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  30.12 
 
 
264 aa  114  1.0000000000000001e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  29.12 
 
 
262 aa  112  5e-24  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1209  short chain dehydrogenase/reductase family oxidoreductase  30.74 
 
 
253 aa  110  2.0000000000000002e-23  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1192  oxidoreductase, short chain dehydrogenase/reductase family  29.76 
 
 
255 aa  107  2e-22  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0875  Short-chain dehydrogenase of various substrate specificities  29.92 
 
 
264 aa  106  3e-22  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.00123287 
 
 
-
 
NC_009513  Lreu_0660  short-chain dehydrogenase/reductase SDR  29.63 
 
 
284 aa  99.8  4e-20  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
BN001305  ANIA_05318  hypothetical protein similar to nonribosomal peptide synthetase 10 (Broad)  30.51 
 
 
1270 aa  87  3e-16  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.556036  normal  0.849429 
 
 
-
 
NC_008701  Pisl_1529  short-chain dehydrogenase/reductase SDR  29.57 
 
 
265 aa  82.8  0.000000000000005  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.0206025  normal  0.910086 
 
 
-
 
NC_013926  Aboo_0372  short-chain dehydrogenase/reductase SDR  29.63 
 
 
219 aa  81.3  0.00000000000001  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  26.39 
 
 
260 aa  80.9  0.00000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_0320  short-chain dehydrogenase/reductase SDR  27.47 
 
 
240 aa  79.3  0.00000000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1117  short-chain dehydrogenase/reductase SDR  28.84 
 
 
233 aa  78.2  0.0000000000001  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000223483  normal  0.996665 
 
 
-
 
NC_009440  Msed_1778  short-chain dehydrogenase/reductase SDR  30 
 
 
243 aa  78.2  0.0000000000001  Metallosphaera sedula DSM 5348  Archaea  normal  0.809428  normal 
 
 
-
 
NC_014212  Mesil_1171  short-chain dehydrogenase/reductase SDR  28.64 
 
 
238 aa  77.4  0.0000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.399765 
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  30 
 
 
238 aa  77  0.0000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_012034  Athe_0213  short-chain dehydrogenase/reductase SDR  27.48 
 
 
264 aa  76.6  0.0000000000004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009425  Ent638_4222  short-chain dehydrogenase/reductase SDR  31.31 
 
 
242 aa  75.9  0.0000000000005  Enterobacter sp. 638  Bacteria  normal  0.186526  normal 
 
 
-
 
NC_008527  LACR_0655  Short-chain dehydrogenase of various substrate specificities  25.61 
 
 
233 aa  75.9  0.0000000000006  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3982  short-chain dehydrogenase/reductase SDR  29.02 
 
 
225 aa  75.5  0.0000000000007  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3800  short-chain dehydrogenase/reductase SDR  29.02 
 
 
225 aa  75.5  0.0000000000007  Shewanella baltica OS223  Bacteria  hitchhiker  0.0000125845  normal 
 
 
-
 
NC_011126  HY04AAS1_0976  short-chain dehydrogenase/reductase SDR  27.17 
 
 
244 aa  75.5  0.0000000000008  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0501  short-chain dehydrogenase/reductase SDR  27.17 
 
 
264 aa  75.5  0.0000000000008  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.132419  n/a   
 
 
-
 
NC_008699  Noca_1729  short chain dehydrogenase  28.33 
 
 
227 aa  75.5  0.0000000000008  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0727  short-chain dehydrogenase/reductase SDR  25.74 
 
 
245 aa  75.1  0.000000000001  Psychrobacter cryohalolentis K5  Bacteria  decreased coverage  0.00978147  normal 
 
 
-
 
NC_008009  Acid345_3255  short-chain dehydrogenase/reductase SDR  24.1 
 
 
262 aa  74.7  0.000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.207826 
 
 
-
 
NC_002976  SERP2049  short chain dehydrogenase/reductase family oxidoreductase  26.32 
 
 
230 aa  73.9  0.000000000002  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1990  short-chain dehydrogenase/reductase SDR  27.96 
 
 
243 aa  74.3  0.000000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3847  short-chain dehydrogenase/reductase SDR  26.46 
 
 
247 aa  74.3  0.000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0268  short-chain dehydrogenase/reductase SDR  25 
 
 
251 aa  74.3  0.000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1300  short-chain dehydrogenase/reductase SDR  26.39 
 
 
262 aa  74.3  0.000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3856  short-chain dehydrogenase/reductase SDR  28.5 
 
 
225 aa  73.9  0.000000000002  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0818  short chain dehydrogenase  25.11 
 
 
242 aa  73.6  0.000000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7667  short-chain dehydrogenase/reductase SDR  24.29 
 
 
332 aa  73.2  0.000000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.755346  n/a   
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  23.81 
 
 
269 aa  72.4  0.000000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_010655  Amuc_0363  short-chain dehydrogenase/reductase SDR  30.32 
 
 
281 aa  72.4  0.000000000006  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
CP001800  Ssol_2000  short-chain dehydrogenase/reductase SDR  27.42 
 
 
247 aa  72.4  0.000000000007  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_007575  Suden_1903  Short-chain dehydrogenase/reductase SDR  24.8 
 
 
242 aa  72.4  0.000000000007  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  24.46 
 
 
269 aa  72.4  0.000000000007  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_014150  Bmur_1122  short-chain dehydrogenase/reductase SDR  27.51 
 
 
258 aa  72  0.000000000008  Brachyspira murdochii DSM 12563  Bacteria  normal  0.0189644  n/a   
 
 
-
 
NC_009077  Mjls_3724  short-chain dehydrogenase/reductase SDR  29.79 
 
 
247 aa  72  0.000000000009  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3711  short-chain dehydrogenase/reductase SDR  29.79 
 
 
247 aa  72  0.000000000009  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3784  short-chain dehydrogenase/reductase SDR  29.79 
 
 
247 aa  72  0.000000000009  Mycobacterium sp. KMS  Bacteria  normal  0.513657  normal  0.265032 
 
 
-
 
NC_013132  Cpin_6680  short-chain dehydrogenase/reductase SDR  25.5 
 
 
258 aa  71.2  0.00000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0030  3-oxoacyl-(acyl-carrier-protein) reductase, putative  28.8 
 
 
245 aa  71.6  0.00000000001  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1940  tropinone reductase  27.69 
 
 
258 aa  71.2  0.00000000001  Xylella fastidiosa M12  Bacteria  normal  0.803191  n/a   
 
 
-
 
NC_010577  XfasM23_1875  tropinone reductase  27.59 
 
 
258 aa  71.2  0.00000000001  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0723  short chain dehydrogenase/reductase family oxidoreductase  27.34 
 
 
275 aa  71.6  0.00000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.158642  n/a   
 
 
-
 
NC_009954  Cmaq_1757  3-ketoacyl-(acyl-carrier-protein) reductase  30.16 
 
 
302 aa  72  0.00000000001  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_002950  PG1221  short chain dehydrogenase/reductase family oxidoreductase  25.3 
 
 
241 aa  70.5  0.00000000002  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.810471 
 
 
-
 
NC_003910  CPS_1382  short chain dehydrogenase/reductase family oxidoreductase  23.05 
 
 
251 aa  70.5  0.00000000002  Colwellia psychrerythraea 34H  Bacteria  normal  0.0851667  n/a   
 
 
-
 
NC_007005  Psyr_0959  Short-chain dehydrogenase/reductase SDR  26.29 
 
 
262 aa  70.9  0.00000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3338  tropinone reductase  25.57 
 
 
267 aa  70.9  0.00000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0617958 
 
 
-
 
NC_007492  Pfl01_4738  Short-chain dehydrogenase/reductase SDR  24.74 
 
 
260 aa  70.9  0.00000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.9226  normal  0.284155 
 
 
-
 
NC_010506  Swoo_2775  short-chain dehydrogenase/reductase SDR  26.16 
 
 
238 aa  70.9  0.00000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  0.88847  normal  0.739494 
 
 
-
 
NC_013037  Dfer_2590  short chain dehydrogenase  29.07 
 
 
236 aa  70.9  0.00000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4158  short-chain dehydrogenase/reductase SDR  27.66 
 
 
262 aa  70.9  0.00000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.526951  normal 
 
 
-
 
NC_011353  ECH74115_0323  clavaldehyde dehydrogenase  25.69 
 
 
245 aa  70.9  0.00000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.869868 
 
 
-
 
NC_009504  BOV_A0027  putative 3-oxoacyl-(acyl-carrier-protein) reductase  28.8 
 
 
245 aa  70.9  0.00000000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0371  short-chain dehydrogenase/reductase SDR  21.99 
 
 
243 aa  70.5  0.00000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  30.61 
 
 
258 aa  70.9  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  26.56 
 
 
262 aa  70.9  0.00000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3213  short-chain dehydrogenase/reductase SDR  27.65 
 
 
263 aa  70.1  0.00000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.192712  n/a   
 
 
-
 
NC_007802  Jann_4017  short-chain dehydrogenase/reductase SDR  25.1 
 
 
245 aa  70.5  0.00000000003  Jannaschia sp. CCS1  Bacteria  normal  0.980517  normal 
 
 
-
 
NC_014230  CA2559_06330  oxidoreductase  28.44 
 
 
243 aa  70.5  0.00000000003  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.646831  n/a   
 
 
-
 
NC_009921  Franean1_7095  short-chain dehydrogenase/reductase SDR  29.26 
 
 
252 aa  70.1  0.00000000003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008531  LEUM_0971  Short-chain alcohol dehydrogenase  26.49 
 
 
287 aa  70.1  0.00000000003  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_0217  short-chain dehydrogenase/reductase SDR  31.05 
 
 
240 aa  69.7  0.00000000004  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_013205  Aaci_2186  3-ketoacyl-(acyl-carrier-protein) reductase  25.68 
 
 
241 aa  69.7  0.00000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_10628  short chain dehydrogenase  31.69 
 
 
239 aa  69.7  0.00000000004  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.10817  n/a   
 
 
-
 
NC_010002  Daci_0612  short-chain dehydrogenase/reductase SDR  27.81 
 
 
245 aa  70.1  0.00000000004  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3305  short-chain dehydrogenase/reductase SDR  27.89 
 
 
268 aa  69.7  0.00000000004  Frankia sp. EAN1pec  Bacteria  normal  normal  0.552464 
 
 
-
 
NC_009621  Smed_5892  short-chain dehydrogenase/reductase SDR  25 
 
 
240 aa  69.7  0.00000000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.197583  normal  0.684579 
 
 
-
 
NC_012560  Avin_32520  Short-chain dehydrogenase/reductase SDR protein  27.87 
 
 
278 aa  69.3  0.00000000005  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1803  short-chain dehydrogenase/reductase SDR  25.93 
 
 
262 aa  69.3  0.00000000006  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.225984 
 
 
-
 
NC_009456  VC0395_0137  short chain dehydrogenase  26.79 
 
 
265 aa  68.9  0.00000000006  Vibrio cholerae O395  Bacteria  normal  0.122699  n/a   
 
 
-
 
NC_012880  Dd703_2717  short chain dehydrogenase  27.08 
 
 
276 aa  69.3  0.00000000006  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011680  PHATRDRAFT_47104  non ribosomal peptide synthase  23.87 
 
 
1367 aa  69.3  0.00000000006  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_010581  Bind_1016  short-chain dehydrogenase/reductase SDR  23.79 
 
 
257 aa  68.9  0.00000000007  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.125705  normal 
 
 
-
 
NC_012029  Hlac_0964  short-chain dehydrogenase/reductase SDR  28.95 
 
 
306 aa  68.9  0.00000000008  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_009052  Sbal_0468  short-chain dehydrogenase/reductase SDR  28.5 
 
 
225 aa  68.6  0.00000000009  Shewanella baltica OS155  Bacteria  decreased coverage  0.00000583805  n/a   
 
 
-
 
NC_010505  Mrad2831_1196  short-chain dehydrogenase/reductase SDR  27.03 
 
 
245 aa  68.6  0.00000000009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.399738  normal 
 
 
-
 
NC_009376  Pars_0834  3-ketoacyl-(acyl-carrier-protein) reductase  29.26 
 
 
299 aa  68.6  0.00000000009  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal  0.391136 
 
 
-
 
NC_013730  Slin_0457  short-chain dehydrogenase/reductase SDR  29.28 
 
 
238 aa  68.6  0.0000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.644121  normal 
 
 
-
 
NC_010831  Cphamn1_0828  short-chain dehydrogenase/reductase SDR  28.51 
 
 
243 aa  68.6  0.0000000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1420  short-chain dehydrogenase/reductase SDR  26.88 
 
 
280 aa  68.2  0.0000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0142  short-chain dehydrogenase/reductase SDR  29.32 
 
 
255 aa  68.2  0.0000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
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