| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3145 |
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| Symbol | |
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| ID | 5210115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3955765 |
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| End bp | 3957372 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640596736 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001277456 |
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| Protein GI | 148657251 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.61705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACAC TGCACCAGAA TCGCAACATG TCGCAGTCTG TCGTTCTGAT CACCGGCGCA
ACGGACGGCA TCGGTCGGGC GCTGACGCAG ATCTATCGTG CGCGCGGGGC GCGGGTGCTC
GGTATCGGGC GGCGCCCGGC GGAAGAGGTG TCGCCAGATC TGCGCAGTGA CTATTGTCGT
GTTGATCTGG CGCAACCGTT CGCTTCCGCG CTGGTTGCCG ACGTTCTGCG GCAACGAGGC
GTCGCCCGCC TTGATCGGCT CATCCACTGC GCCGGGATCG GCTCATACGG CGCGGTCGAT
GATCAGACGC CGGAAGCGAT CGATGCGCTG CTGGACGTGA ACCTGCGCGC GCCGATTGCG
CTCACCCACG CGCTGCTTCC GCTTCTGATC GCAGCACACG GACACGTGAC GTTTATCGGG
TCGATAGCGG CAGCATTGCC CGCACCCAAC TACGCAGTGT ATGGCGCAAC CAAAGCGGCG
CTGGAAGGGT TTGCCCGCAG CCTGCGCGAA GAACTGCGCG GACGGGTCGG GGTTCAGATT
GTGCATCCAG GCGCCACACG CACCGGCATG CACGCAAAAT CCGGCGTGCC GCCCGACCGC
GTCAATGCGC GTCGCTTTCC ATCACCCATG TGGACGGCGG AGCGGATCGT GCGTGCTATC
GAGCGGAACG CCGCAGTAAC GACGATTGGA TCGGTCAATC GCCTGCTGCG TCGTGTCGGC
AGGCATGCGG GCGAAATTGC GGACGCGGTT GCCGCTCGCC AGGTGGTCGC ACCGCACCAT
ACGATTGGCG ATACGACCCA TCCGCCAGGG ATGCTTTCCA CTGGCGGTCG GCGGCACTGT
GTTGTGACCG GCGGCGCAAA TGGGATCGGA CGCGCAGTTG TCGAACGGTA TGCGCGTGAC
GGTTGGCTGG TGACGATCAT CGACCGTGAA GCGCCGCAGA TCAACCGCAC CGTTCAGGAT
GCCACGACAT TCATCCAGGC TGATCTTGCA CATTCAGAAG GGATCGACCG GGCGTTACGC
CATCTCGCCG CGCTTCCCGC CGCCGACGTT GTGGTGCAGA GCGCCGGAAT CAATGCGGTT
GGCGCGTTTG CAGCCAGTGC CATCGATGAA CAACTGACCG TGATCGATGT CAACCTGCGC
GCGCCGCTCC ACCTGACCGC CGGACTGCTG CGTTTCGCAC TGCTGGCGCC CCGCGCGACT
CTCGTCTTTA TCGCGTCGCT ATCAGTCTAC ACTGGTTACC CCGGAGCGGC AGTCTACGCA
GCAAGCAAAG ATGGTTTGTC TTCATATGCG CGCAGTTTGC GGGTGGCGCT GGCGCAGCGG
CATATGAACG TAATAACGGT GTACCCCGGA CCGACGCGCA CCGCCCATGC GCGGCGCTAC
AGTCCCGACA ACCGGCGCGA GAGTCGTCGG ATGGCGCCGG AACGTGTGGC GGCGTGCATC
GCAACTGCTG TCGAACGGCG TCGCGCCAGG GTGATTCCGG GCATAACCAA CCAGGCGATT
GCACTGATCG GAAGCGTGGC GCCGACGCTG ACCATGTATG CCATGCGGAA AACGCTCTTC
GAGCGTCTGG AAGCCGTATC CGGCGATGTG AAGGCGGGGC GACCATGA
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| Protein sequence | MVTLHQNRNM SQSVVLITGA TDGIGRALTQ IYRARGARVL GIGRRPAEEV SPDLRSDYCR
VDLAQPFASA LVADVLRQRG VARLDRLIHC AGIGSYGAVD DQTPEAIDAL LDVNLRAPIA
LTHALLPLLI AAHGHVTFIG SIAAALPAPN YAVYGATKAA LEGFARSLRE ELRGRVGVQI
VHPGATRTGM HAKSGVPPDR VNARRFPSPM WTAERIVRAI ERNAAVTTIG SVNRLLRRVG
RHAGEIADAV AARQVVAPHH TIGDTTHPPG MLSTGGRRHC VVTGGANGIG RAVVERYARD
GWLVTIIDRE APQINRTVQD ATTFIQADLA HSEGIDRALR HLAALPAADV VVQSAGINAV
GAFAASAIDE QLTVIDVNLR APLHLTAGLL RFALLAPRAT LVFIASLSVY TGYPGAAVYA
ASKDGLSSYA RSLRVALAQR HMNVITVYPG PTRTAHARRY SPDNRRESRR MAPERVAACI
ATAVERRRAR VIPGITNQAI ALIGSVAPTL TMYAMRKTLF ERLEAVSGDV KAGRP
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