Gene RoseRS_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0388 
Symbol 
ID5207323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp490954 
End bp491763 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content67% 
IMG OID640594013 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001274769 
Protein GI148654564 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.14599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTATC TTCAACAGAA GCATGTTCTG ATCACCGGCG CGTCCTACGG GATCGGCGCT 
GCGACGGCAC GGGCGTTTGG GCGGCGCGGA GCGCACGTGG CGCTGCTGGC GCGCACGCAG
ACGGCGCTGG AAGATGTGGC GCGCGACATT CGCGCAGCCG GAGGCGCGGC ATCGGTGTAT
CCTGTCGATC TGACCGATGC ACAGGCGGTC AATGCGGTTG CGCAACGGGT GATGGCCGAC
CTCGGTCCCC CCGACATCCT GCTGAGCAAT GCTGGCGCCG GACGCTGGCT CTTCATCGAA
GAGACGACGC CGGAAGAGGC GGTTGCCATG ATGGCAATGC CCTACTTTGC TGCATTCTTC
ATCACGCGCG CGTTCTTGCC CGCCATGCGC GCCCGCAATC GCGGATGTCT GGCATATGTC
AACTCACCTG CCTCGCTCGT GGCATGGCCC GGCGCGGCAA CGTACACCGC CGCGCGCTGG
GCGCTCCGTG GGTTTGTCGA AGCGCTGCGC GCCGAAGTGT ACGGTACCGG GCTACGGGTA
ACCGCGATCA TTCCGGGGCT GGTGGCAACC ACCTATTTCG AGCACAACCC CGGCGTGCTG
GATCGGGTGC CGGGTCTGGC GCGTCGCCTG CTGCGCCCGC TCACCGCAGA ACAGGCGGCA
GACGCGATTG TGCGCGGCAT TGCGCATGGC GAGCGCGAGA TCGTGCTGCC GCGGATGCTG
CGCCTGCTCT ATGCCGCACA CGCCGTCGCC CCCGGTCTGG TGCGATGGCT GACCATCCGA
ACCGGCGCTC GACGACCTTC CGGCGCCTGA
 
Protein sequence
MVYLQQKHVL ITGASYGIGA ATARAFGRRG AHVALLARTQ TALEDVARDI RAAGGAASVY 
PVDLTDAQAV NAVAQRVMAD LGPPDILLSN AGAGRWLFIE ETTPEEAVAM MAMPYFAAFF
ITRAFLPAMR ARNRGCLAYV NSPASLVAWP GAATYTAARW ALRGFVEALR AEVYGTGLRV
TAIIPGLVAT TYFEHNPGVL DRVPGLARRL LRPLTAEQAA DAIVRGIAHG EREIVLPRML
RLLYAAHAVA PGLVRWLTIR TGARRPSGA