| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0388 |
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| Symbol | |
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| ID | 5207323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 490954 |
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| End bp | 491763 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640594013 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001274769 |
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| Protein GI | 148654564 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.14599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTATC TTCAACAGAA GCATGTTCTG ATCACCGGCG CGTCCTACGG GATCGGCGCT
GCGACGGCAC GGGCGTTTGG GCGGCGCGGA GCGCACGTGG CGCTGCTGGC GCGCACGCAG
ACGGCGCTGG AAGATGTGGC GCGCGACATT CGCGCAGCCG GAGGCGCGGC ATCGGTGTAT
CCTGTCGATC TGACCGATGC ACAGGCGGTC AATGCGGTTG CGCAACGGGT GATGGCCGAC
CTCGGTCCCC CCGACATCCT GCTGAGCAAT GCTGGCGCCG GACGCTGGCT CTTCATCGAA
GAGACGACGC CGGAAGAGGC GGTTGCCATG ATGGCAATGC CCTACTTTGC TGCATTCTTC
ATCACGCGCG CGTTCTTGCC CGCCATGCGC GCCCGCAATC GCGGATGTCT GGCATATGTC
AACTCACCTG CCTCGCTCGT GGCATGGCCC GGCGCGGCAA CGTACACCGC CGCGCGCTGG
GCGCTCCGTG GGTTTGTCGA AGCGCTGCGC GCCGAAGTGT ACGGTACCGG GCTACGGGTA
ACCGCGATCA TTCCGGGGCT GGTGGCAACC ACCTATTTCG AGCACAACCC CGGCGTGCTG
GATCGGGTGC CGGGTCTGGC GCGTCGCCTG CTGCGCCCGC TCACCGCAGA ACAGGCGGCA
GACGCGATTG TGCGCGGCAT TGCGCATGGC GAGCGCGAGA TCGTGCTGCC GCGGATGCTG
CGCCTGCTCT ATGCCGCACA CGCCGTCGCC CCCGGTCTGG TGCGATGGCT GACCATCCGA
ACCGGCGCTC GACGACCTTC CGGCGCCTGA
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| Protein sequence | MVYLQQKHVL ITGASYGIGA ATARAFGRRG AHVALLARTQ TALEDVARDI RAAGGAASVY
PVDLTDAQAV NAVAQRVMAD LGPPDILLSN AGAGRWLFIE ETTPEEAVAM MAMPYFAAFF
ITRAFLPAMR ARNRGCLAYV NSPASLVAWP GAATYTAARW ALRGFVEALR AEVYGTGLRV
TAIIPGLVAT TYFEHNPGVL DRVPGLARRL LRPLTAEQAA DAIVRGIAHG EREIVLPRML
RLLYAAHAVA PGLVRWLTIR TGARRPSGA
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