| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3415 |
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| Symbol | |
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| ID | 4923569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4069409 |
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| End bp | 4070215 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640165027 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001095540 |
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| Protein GI | 127514343 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.560569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTT TAGCCGACAA GGTCGTTATC ATCACGGGTG CCTCAGAGGG AATTGGCCGA
GCCCTGGCCA AGGCGATGGC GCCCCTGGGA TGTCGCCTGG TGCTCACCGC CCGCAGTCAG
GGGCGACTGC ACTCCCTGCA GCAGGAGCTC TCGTCCATCG CCAGCGTGCC GCCCTTAGTG
ATCCCCGCCG ATGTCACCGA CGCCGCTGCC TGCCAAGGCC TCATCGATGC CTGTGTGGCC
CATTTCGACC GCCTGGATAT TTTGGTCAAC AATGCCGGCA TGACCATGTG GTCGCGCTTC
GATGAGCTCG AAGACCTCTC CATTCTCGAA CGTGTGATGC AGGTTAACTA TCTGGCCCCG
GCCATGCTGA CCCATTTTGC CCTGCCGCAC CTCAAGGCCA GTCGTGGTCA GATTGTGGTG
GTGGCCTCGG TGGCAGGACT CACCGGTGTG CCTACCCGCA GCGGTTACAG CGCCTCCAAG
CATGCGGTGA TGGGTTTCTT CGACTCGCTG CGCATCGAGC TGGTGGAACA TGATGTGGCC
GTCACCCATA TCTGTCCCGA TTTCGTGGTG TCAGAGATCC ATAAGCGCGC CCTGGATGGC
CAGGGGAATC CCCTCGGTAA GAGTCCGATG CAGGAGGCTA AGATCATCAC CGCCGAGCAG
TGCGCCCAGA TGATGCTGCC GGCCATCGCC GGGCGTAAGC GACTGCTTAT TACCTCGACG
CGTGGCCGCC TAGGCCGCTG GTTTAAGCTT ATCGCTCCAG GCCTGATCGA TAAGATCGCC
CGCAAGGCGA TCGCCTCAGG GCATTGA
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| Protein sequence | MQTLADKVVI ITGASEGIGR ALAKAMAPLG CRLVLTARSQ GRLHSLQQEL SSIASVPPLV
IPADVTDAAA CQGLIDACVA HFDRLDILVN NAGMTMWSRF DELEDLSILE RVMQVNYLAP
AMLTHFALPH LKASRGQIVV VASVAGLTGV PTRSGYSASK HAVMGFFDSL RIELVEHDVA
VTHICPDFVV SEIHKRALDG QGNPLGKSPM QEAKIITAEQ CAQMMLPAIA GRKRLLITST
RGRLGRWFKL IAPGLIDKIA RKAIASGH
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