Gene Rmar_2639 details

Gene Information

• Locus tag: Rmar_2639
• ID: 8569308
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 3063567
• End bp: 3064283
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 65%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003291899
• Protein GI: 268318180

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.37123
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCTTC GGGATAAAGT GGCCATCGTG ACCGGCGCCA GCAGCGGGCT GGGCCGGGCC 
TTTGCGATTG CGCTCGTGCA GAAAGGCGCG CACGTGTACG GACTGGCCCG GCGCGTCGAG 
CGTCTGAACG CGCTCCGCGA CGAACTGGGC CCCCGCTTCC ATCCGATCGC CTGCGACGTG 
ACGCGGCCCA ACGACGTCGA GGCGGCCTTT CAGCGCGTGA TCCGCGAGGC CGGTCGTCTG 
GACATCCTGA TTAACAATGC GGGGCTGGGC AAAATGGGGC CGGTCGATGA GCTTTCGCTG 
GAAGACTGGG ATGTGCAGAT GAACACGAAC CTGCGCGGCG TCTTTCTCTG CACGCGCGCG 
GCCGTGCCCC AGATGAAAAA GCAGAACGCC GAGACCGGCT TCGGCGGGCA TATCATCAAC 
ATCGCCTCGG TGGCCGGCCT GATCGGCAAC CCTAACCTGA GCGCCTACAA CGCCACGAAG 
TTCGGCGTGC GCGGCTTCAG CGAGGCCATC ATGAAGGAGC TGCGCGACCA CGGCATCAAG 
GTGACCTGCG TCTATCCGGG CTCCGTCGCC ACCGAGTTCT TCGAGGTGTC CGGCATGCGC 
GGGGCCGACC GCCCCGTCAC GCCCGAGCAG GTGGCCCAGA CCATCCTGCA CATTCTGGAG 
ACCGACGACA ACTACCTGAT CTCCGAGGTG GTCATCCGAC CACTCCGGCC ACGGTAA 

 

Protein sequence

MELRDKVAIV TGASSGLGRA FAIALVQKGA HVYGLARRVE RLNALRDELG PRFHPIACDV 
TRPNDVEAAF QRVIREAGRL DILINNAGLG KMGPVDELSL EDWDVQMNTN LRGVFLCTRA 
AVPQMKKQNA ETGFGGHIIN IASVAGLIGN PNLSAYNATK FGVRGFSEAI MKELRDHGIK 
VTCVYPGSVA TEFFEVSGMR GADRPVTPEQ VAQTILHILE TDDNYLISEV VIRPLRPR