Gene Amir_7025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_7025 
Symbol 
ID8331246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp8162471 
End bp8163160 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content77% 
IMG OID644947454 
Productshort chain dehydrogenase 
Protein accessionYP_003104663 
Protein GI256381003 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAC GCCCCGCAGC CCTGATCACC GGAGCCTCCC GAGGCATCGG CGCCGCCGTG 
GCGCGCGCCC TCGCCCCCAC CCACGACGTG CTGCTCGGCG GCCGTGACGA GGCCGCGCTG 
CGGGCGCTGG CCGACGAGCT GCCCGGCGCC CGGCCGTTCG CCGTCGAGCT GACCGACGCG 
GAGGCGCTCG CCGGGGCGGT CGCCGGGATC GAGCGGTTGG ACGTGCTGGT GCACAGCGCG 
GGCGTGGCCG AGCTGGGGCC GCTGTCCGGT GCGTCGGCCG AGGTGTGGCG GCGCACCCTG 
GAGGTCAACG TCGTCGCGGT CGCCGAGCTG ACCCGGTTGG CGCTGCCGCT GCTGCGCGAG 
GCGCGCGGCG ACGTGGTGCT GATCAACTCG GGCGCCGGGC TGCGCGCGAA CCCCGGCTGG 
GGCGTCTACG CGGCCAGCAA GTTCGCGCTG CGGGCGTTCG GCGACGTCCT GCGGGCCGAG 
GAGCCCGCCC TGCGCGTCAC CTCGGTGCAC CCCGGCCGGG TCGACACGGA CATGCAGCGC 
GACGTGCGGC AGCAGGAGGG CGGCGAGTAC GAGGCCGAGC TGTACCTGCG GGCCGAGTCC 
GTCGCGGACG CCGTGGCGCG CGCGGTGCTG GCCGGGGACG ACGCGCACAT CACCGAGATC 
GTGGTGCGCC CGAGGACCAG GCTGGGCTGA
 
Protein sequence
MTERPAALIT GASRGIGAAV ARALAPTHDV LLGGRDEAAL RALADELPGA RPFAVELTDA 
EALAGAVAGI ERLDVLVHSA GVAELGPLSG ASAEVWRRTL EVNVVAVAEL TRLALPLLRE 
ARGDVVLINS GAGLRANPGW GVYAASKFAL RAFGDVLRAE EPALRVTSVH PGRVDTDMQR 
DVRQQEGGEY EAELYLRAES VADAVARAVL AGDDAHITEI VVRPRTRLG