Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1668 |
Symbol | |
ID | 6115909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2064464 |
End bp | 2065219 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641633151 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001760049 |
Protein GI | 170726023 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAATG AGTTAGCTGG AAAAACCATT TTGGTCACAG GCGCATCTTC TGGATTAGGA AAGGCTATTG CTATTTATTT TAGTACAGTC GGAGCTAGGG TTGTATTAAC CGGTCGAAAT GAAGAGCGTT TACACGAAAC GCTAAAGGAC ATGAGTGGTT CTAACCACCT TTATTTTATA GCTGATCTGG CAAAAGTAGA GTCAACTCAA GCAATGATGG ATACTGTTTT TGCTAATGTT GGGGCTCTTG ATAGTGTTAT TCATTGTGCT GGAATTCAAA AGACCCTGCC ACTACAAGCT TTGAAAGAAC ATCACTTCGA TGATATTTTT AATACAAATG TGAAAAGTGC CCAGTTTATC GCTAAGTTTT TGCGTAAAAA AGGCAGGTAC AACTCACAAG GTACAAGCTT AGTTTTACTC AGTTCAGTTG CTGCGGTGTG CGGCGAGCCT GCAATTTCTA GTTATTCAGC CTCCAAGGCT GCATTATTGG GGTTATCCAA GTCTTTAGCT ATAGAGCTAG CACGTCAAAA TATTCGAGTT AATTGTATAG CACCCGGTCA TGTTGGGACT GAAATGGCGA TAGAGTTTAG TAAACAGCTT ACAGCTGAGC AACGTGAAAA CATTCTGCTT AAGCATCCAC TTGGCCTTGG TAAACCTGAA TATATCGCTC AAGCTGCAGA GTTTTTAGCA AGTGATAAGT CATGTTGGAT CACCGGGACA ACTATTTTTG TTGATGGTGG ATATAGTGCT CACTAA
|
Protein sequence | MSNELAGKTI LVTGASSGLG KAIAIYFSTV GARVVLTGRN EERLHETLKD MSGSNHLYFI ADLAKVESTQ AMMDTVFANV GALDSVIHCA GIQKTLPLQA LKEHHFDDIF NTNVKSAQFI AKFLRKKGRY NSQGTSLVLL SSVAAVCGEP AISSYSASKA ALLGLSKSLA IELARQNIRV NCIAPGHVGT EMAIEFSKQL TAEQRENILL KHPLGLGKPE YIAQAAEFLA SDKSCWITGT TIFVDGGYSA H
|
| |