Gene Syncc9605_0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0731 
Symbol 
ID3735353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp699057 
End bp699764 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID637775331 
Productshort chain dehydrogenase 
Protein accessionYP_381058 
Protein GI78212279 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.510402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTACGG CTCTAATCAC AGGTGCGAGC CGAGGCATAG GTCGCCGAAC TGCTGAGCTT 
CTGGCTCATC AGGGCTGGGA CTTGCTGCTC ACTGCACGTA GCGCTGATCA ACTGGAGCAG
CTGAGTGATC AGCTCAGCTC CAAGGGTGTC TCTGTGGCCT CTGCCGCCGT CGACCTGACT
CAACCTGATG GCATCGCTTT TGCGATGGCT GGCTTGTTGC AGCAGGGTGA GACCCCTTCA
GTGTTGATCA ACAACGCGGG GGCTGCTTAC ACCGGCGATC TATTGGCAAT GCCGATCGAG
CGTTGGCAAT GGCTGCTACA GCTGAATGTC ACCAGCGTGA TGCAGGTTTG TGCTGCTGTT
GTCCCCTCCA TGCGTGAGAA CGGCGGACTG GTGATCAACA TCAGCAGCCA CGCCGCCCGC
AATGCCTTCC CTCAATGGGG TGCGTATTGC GTCAGCAAAG CTGCCCTGGC CAGCTTCACC
CGCTGCCTGG CGGAAGAGGA ACGGAGCAAC GACATCCGTG CCTGCACCCT CACTCTTGGG
GCAGTCAACA CACCTCTGTG GGACGCGGAA ACCGTACAAA GCGATTTCGA TCGTCGTGCC
ATGCTCTCTG TCGATCAGGC GGCAGAAACA CTGGCGAATC TGGCGATGCA ACCCAGCAAC
CAGTTGATCG AAGACCTCAC CCTTATGCCG GCCGCCGGCG CCTTCTGA
 
Protein sequence
MPTALITGAS RGIGRRTAEL LAHQGWDLLL TARSADQLEQ LSDQLSSKGV SVASAAVDLT 
QPDGIAFAMA GLLQQGETPS VLINNAGAAY TGDLLAMPIE RWQWLLQLNV TSVMQVCAAV
VPSMRENGGL VINISSHAAR NAFPQWGAYC VSKAALASFT RCLAEEERSN DIRACTLTLG
AVNTPLWDAE TVQSDFDRRA MLSVDQAAET LANLAMQPSN QLIEDLTLMP AAGAF