More than 300 homologs were found in PanDaTox collection
for query gene VEA_002433 on replicon NC_013456
Organism: Vibrio sp. Ex25



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013456  VEA_002433  putative short-chain dehydrogenase  100 
 
 
221 aa  461  1e-129  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03631  hypothetical protein  69.23 
 
 
221 aa  320  9.999999999999999e-87  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_2183  putative short-chain dehydrogenase  60.91 
 
 
221 aa  273  2.0000000000000002e-72  Shewanella sediminis HAW-EB3  Bacteria  normal  0.766621  normal 
 
 
-
 
NC_009901  Spea_0532  short-chain dehydrogenase/reductase SDR  59.09 
 
 
220 aa  268  2.9999999999999997e-71  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00000466004  n/a   
 
 
-
 
NC_008345  Sfri_2454  short-chain dehydrogenase/reductase SDR  58.93 
 
 
225 aa  266  2e-70  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0706  short-chain dehydrogenase/reductase SDR  57.78 
 
 
225 aa  261  4.999999999999999e-69  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3800  short-chain dehydrogenase/reductase SDR  54.91 
 
 
225 aa  254  7e-67  Shewanella baltica OS223  Bacteria  hitchhiker  0.0000125845  normal 
 
 
-
 
NC_009997  Sbal195_3982  short-chain dehydrogenase/reductase SDR  54.46 
 
 
225 aa  253  1.0000000000000001e-66  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3856  short-chain dehydrogenase/reductase SDR  54.46 
 
 
225 aa  253  2.0000000000000002e-66  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0468  short-chain dehydrogenase/reductase SDR  54.02 
 
 
225 aa  242  3e-63  Shewanella baltica OS155  Bacteria  decreased coverage  0.00000583805  n/a   
 
 
-
 
NC_009438  Sputcn32_3349  short-chain dehydrogenase/reductase SDR  55.36 
 
 
225 aa  233  2.0000000000000002e-60  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1876  short-chain dehydrogenase/reductase SDR  52.89 
 
 
226 aa  231  7.000000000000001e-60  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0509  short-chain dehydrogenase/reductase SDR  54.91 
 
 
225 aa  229  3e-59  Shewanella sp. ANA-3  Bacteria  normal  0.832516  normal 
 
 
-
 
NC_004347  SO_0510  short chain dehydrogenase/reductase family oxidoreductase  55.36 
 
 
225 aa  227  1e-58  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0509  short-chain dehydrogenase/reductase SDR  54.46 
 
 
225 aa  216  2.9999999999999998e-55  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3522  short-chain dehydrogenase/reductase SDR  54.46 
 
 
225 aa  216  2.9999999999999998e-55  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0416  short-chain alcohol dehydrogenase  30.84 
 
 
235 aa  95.1  7e-19  Bifidobacterium longum DJO10A  Bacteria  normal  0.279959  n/a   
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  28.32 
 
 
270 aa  89.4  4e-17  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_003910  CPS_4937  short chain dehydrogenase/reductase family oxidoreductase  29.1 
 
 
239 aa  87.8  1e-16  Colwellia psychrerythraea 34H  Bacteria  normal  0.396795  n/a   
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  28.38 
 
 
270 aa  86.3  3e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3000  short-chain dehydrogenase/reductase SDR  28.31 
 
 
241 aa  86.3  3e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008701  Pisl_1529  short-chain dehydrogenase/reductase SDR  31.87 
 
 
265 aa  86.3  3e-16  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.0206025  normal  0.910086 
 
 
-
 
NC_010803  Clim_2370  short-chain dehydrogenase/reductase SDR  26.36 
 
 
253 aa  85.5  5e-16  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  31.63 
 
 
257 aa  85.9  5e-16  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2257  short-chain dehydrogenase/reductase SDR  28.5 
 
 
267 aa  85.1  8e-16  Meiothermus ruber DSM 1279  Bacteria  normal  0.229091  hitchhiker  0.0024535 
 
 
-
 
NC_004347  SO_4141  short chain dehydrogenase/reductase family oxidoreductase  27.62 
 
 
243 aa  84.3  0.000000000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  31.22 
 
 
256 aa  84.3  0.000000000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0501  short-chain dehydrogenase/reductase SDR  29.26 
 
 
264 aa  83.6  0.000000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.132419  n/a   
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  26.67 
 
 
238 aa  83.6  0.000000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_008009  Acid345_2262  short-chain dehydrogenase/reductase SDR  26.34 
 
 
244 aa  83.6  0.000000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.0000989308  normal 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  29.21 
 
 
273 aa  84  0.000000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_3927  short-chain dehydrogenase/reductase SDR  25.47 
 
 
235 aa  83.2  0.000000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0764891  hitchhiker  0.00221105 
 
 
-
 
NC_010501  PputW619_3021  short chain dehydrogenase  25.59 
 
 
268 aa  83.2  0.000000000000003  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_4341  short-chain dehydrogenase/reductase SDR  24.88 
 
 
236 aa  82.8  0.000000000000004  Cyanothece sp. PCC 8802  Bacteria  normal  0.157663  normal 
 
 
-
 
NC_011726  PCC8801_4281  short-chain dehydrogenase/reductase SDR  24.88 
 
 
236 aa  82.8  0.000000000000004  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008261  CPF_2906  short chain dehydrogenase/reductase family oxidoreductase  29.86 
 
 
257 aa  82.8  0.000000000000004  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3687  short-chain dehydrogenase/reductase SDR  25.7 
 
 
243 aa  82.8  0.000000000000004  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0445  short-chain dehydrogenase/reductase SDR  30.27 
 
 
267 aa  82.4  0.000000000000005  Cyanothece sp. PCC 7425  Bacteria  normal  0.810235  normal  0.221701 
 
 
-
 
NC_008639  Cpha266_0152  short-chain dehydrogenase/reductase SDR  25.38 
 
 
223 aa  82  0.000000000000006  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2585  short chain dehydrogenase/reductase family oxidoreductase  29.38 
 
 
257 aa  81.6  0.000000000000007  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1571  Short-chain alcohol dehydrogenase of unknown specificity  30.27 
 
 
243 aa  81.6  0.000000000000007  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0247  short-chain dehydrogenase/reductase SDR  26.09 
 
 
223 aa  81.6  0.000000000000009  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7667  short-chain dehydrogenase/reductase SDR  28.64 
 
 
332 aa  81.3  0.00000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.755346  n/a   
 
 
-
 
NC_009997  Sbal195_0480  short-chain dehydrogenase/reductase SDR  25.7 
 
 
243 aa  81.3  0.00000000000001  Shewanella baltica OS195  Bacteria  normal  0.853199  normal 
 
 
-
 
NC_013037  Dfer_3961  short-chain dehydrogenase/reductase SDR  25.65 
 
 
236 aa  81.3  0.00000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  28.31 
 
 
269 aa  81.3  0.00000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_002976  SERP2049  short chain dehydrogenase/reductase family oxidoreductase  24.22 
 
 
230 aa  80.9  0.00000000000002  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  29.02 
 
 
264 aa  80.5  0.00000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  28.5 
 
 
264 aa  80.1  0.00000000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  28.57 
 
 
238 aa  80.1  0.00000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  28.5 
 
 
264 aa  80.1  0.00000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0599  short-chain dehydrogenase/reductase SDR  26.82 
 
 
239 aa  80.9  0.00000000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  29.61 
 
 
257 aa  80.5  0.00000000000002  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  27.96 
 
 
262 aa  80.5  0.00000000000002  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  28.5 
 
 
264 aa  79.3  0.00000000000004  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  26.13 
 
 
264 aa  79.3  0.00000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_013946  Mrub_1117  short-chain dehydrogenase/reductase SDR  26.76 
 
 
233 aa  79  0.00000000000005  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000223483  normal  0.996665 
 
 
-
 
NC_011884  Cyan7425_5218  short-chain dehydrogenase/reductase SDR  26.76 
 
 
236 aa  79.3  0.00000000000005  Cyanothece sp. PCC 7425  Bacteria  normal  0.901767  normal 
 
 
-
 
NC_013132  Cpin_6941  short-chain dehydrogenase/reductase SDR  31.22 
 
 
251 aa  79  0.00000000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  27.98 
 
 
264 aa  79  0.00000000000006  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  27.98 
 
 
264 aa  79  0.00000000000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  27.98 
 
 
264 aa  79  0.00000000000006  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  28.91 
 
 
260 aa  79  0.00000000000006  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3145  short-chain dehydrogenase/reductase SDR  28.57 
 
 
535 aa  78.6  0.00000000000007  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.61705 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  29.35 
 
 
266 aa  78.6  0.00000000000007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  29.9 
 
 
259 aa  78.6  0.00000000000008  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013037  Dfer_0510  short-chain dehydrogenase/reductase SDR  29.63 
 
 
355 aa  77.8  0.0000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.453841  normal 
 
 
-
 
NC_013730  Slin_5157  short-chain dehydrogenase/reductase SDR  25.48 
 
 
224 aa  77.8  0.0000000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.0425184  normal  0.202978 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  27.98 
 
 
264 aa  77.8  0.0000000000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3041  short chain dehydrogenase  23.33 
 
 
268 aa  77.4  0.0000000000001  Pseudomonas putida F1  Bacteria  normal  0.631041  normal 
 
 
-
 
NC_009719  Plav_3507  short-chain dehydrogenase/reductase SDR  28.06 
 
 
355 aa  78.2  0.0000000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  27.23 
 
 
266 aa  77.4  0.0000000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2888  Short-chain dehydrogenase/reductase SDR  28.34 
 
 
257 aa  77  0.0000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0119499 
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  29.69 
 
 
259 aa  77  0.0000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  30.52 
 
 
261 aa  77.4  0.0000000000002  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  29.03 
 
 
262 aa  77.4  0.0000000000002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  27.4 
 
 
262 aa  77  0.0000000000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_2064  oxidoreductase ( short-chain dehydrogenase)  26.42 
 
 
264 aa  77  0.0000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.694867  normal  0.0846624 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  26.22 
 
 
263 aa  77  0.0000000000002  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  27.4 
 
 
262 aa  77  0.0000000000002  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5536  short chain dehydrogenase  26.7 
 
 
262 aa  76.6  0.0000000000002  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1420  short-chain dehydrogenase/reductase SDR  26.29 
 
 
280 aa  76.6  0.0000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  27.96 
 
 
260 aa  76.6  0.0000000000003  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  28.51 
 
 
264 aa  76.3  0.0000000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  27.49 
 
 
260 aa  76.3  0.0000000000003  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  25.55 
 
 
272 aa  76.3  0.0000000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_010655  Amuc_0363  short-chain dehydrogenase/reductase SDR  29.9 
 
 
281 aa  76.3  0.0000000000003  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  28.51 
 
 
271 aa  76.6  0.0000000000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  27.4 
 
 
262 aa  76.6  0.0000000000003  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_010505  Mrad2831_5500  short-chain dehydrogenase/reductase SDR  26.34 
 
 
250 aa  76.6  0.0000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  25.22 
 
 
264 aa  76.3  0.0000000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0184  short chain dehydrogenase/reductase family oxidoreductase  26.06 
 
 
239 aa  76.3  0.0000000000004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  27.48 
 
 
265 aa  76.3  0.0000000000004  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_007951  Bxe_A1744  short chain dehydrogenase  28.5 
 
 
275 aa  75.9  0.0000000000004  Burkholderia xenovorans LB400  Bacteria  normal  0.324234  normal 
 
 
-
 
NC_006368  lpp1382  hypothetical protein  28.51 
 
 
259 aa  75.5  0.0000000000006  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009441  Fjoh_2091  short-chain dehydrogenase/reductase SDR  24.38 
 
 
258 aa  75.5  0.0000000000006  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  26.94 
 
 
264 aa  75.1  0.0000000000008  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0885  oxidoreductase, short-chain dehydrogenase/reductase family  29.72 
 
 
256 aa  75.1  0.0000000000008  Bacillus cereus B4264  Bacteria  normal  0.0698186  n/a   
 
 
-
 
NC_007794  Saro_1811  short-chain dehydrogenase/reductase SDR  26.46 
 
 
240 aa  75.1  0.0000000000008  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.300255  n/a   
 
 
-
 
NC_011059  Paes_0216  short-chain dehydrogenase/reductase SDR  27.45 
 
 
223 aa  75.1  0.0000000000008  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.209414  normal 
 
 
-
 
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