| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2262 |
|---|
| Symbol | |
|---|
| ID | 4073256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 2683253 |
|---|
| End bp | 2683987 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637984278 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_591337 |
|---|
| Protein GI | 94969289 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000989308 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATA GCCCGATCGA ATACCTTCCG CTGCATAACC AGGTTTCCGT CGTAACTGGC
TCCAGTCGCG GGATGGGCGC GGCCATTGCC CGCCGCCTTG CGATTATGGG AGCTGCTGTC
GTGATCACGG CGCGTCACGC AGAAGGCCTC TCCGCCACCG CGCAATCCAT CCGCGAGAAC
GGTGGGCAGT GTGAAGCCGT CCCCTGCGAC GTTACGAATC TCGCCCAGGT TGAGGCCGTC
GGGCGCGCCG TAGAAAAAAA GTTCGGGCGC ATCGATATTT TGGTTAACAA CGCGGGCATA
GGGAGCATGG GACGCAAGCT GTGGGAGTTC CCTCCTGATG AATGGGAACG CGTGATGAGC
ACAAACTTGC GCGGCCCTTA CTACCTGATT CGCACGTTTG CTCCCATGAT GATCCGCGCC
AACAGCGGCC ACATCATCAA CATCTCTTCC CTCGCCGGCA AAAATCCTCT CCCGAATGGC
GCTGCTTATT CGGCCTCGAA ATGGGGACTG AACGGGCTTA CGCTTTCCGT CGCCGAGGAG
TTGCGCTCGC ACAACGTTCG CGTCAGCCTC GTCTCTCCCG GTTCCACCGC CACCGACTTC
GGCGATCACT CCGCCAAGAA CGAAAGCAAG ATGCTTTCGG CGGACGATAT CGCGAACGTC
GTAGCGATGC TGGTCACGCA ATCGGCCAAC TCGTTCGTCA GCGAAGTGAA CATTCGTCCC
ACGCAAAAGC CGTAA
|
|---|
| Protein sequence | MADSPIEYLP LHNQVSVVTG SSRGMGAAIA RRLAIMGAAV VITARHAEGL SATAQSIREN
GGQCEAVPCD VTNLAQVEAV GRAVEKKFGR IDILVNNAGI GSMGRKLWEF PPDEWERVMS
TNLRGPYYLI RTFAPMMIRA NSGHIINISS LAGKNPLPNG AAYSASKWGL NGLTLSVAEE
LRSHNVRVSL VSPGSTATDF GDHSAKNESK MLSADDIANV VAMLVTQSAN SFVSEVNIRP
TQKP
|
|---|
| |