Gene Sbal195_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0480 
Symbol 
ID5752197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp550352 
End bp551083 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content50% 
IMG OID641286742 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001552918 
Protein GI160873602 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.853199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAG TTACTAAATC ACTGGTTGTC ATCACGGGCG CTTCATCGGG TATTGGCGCC 
GCTATGGCCA AAAGTTTTAG CGCCGCAGGC CACCCACTGT TATTACTGGC ACGCCGGGTT
GAAGCAATGC AAGCACTTGA ATTACCTAAC AGCCTCTCTA TCAGCGTCGA TGTCACCGAC
ACTGCAGCCA TTAAAACCGC CATAACTCAA GCAGAAGCAC AATTTGGCCC TGTCGGCTGT
CTTATCAATA ACGCGGGTGT GATGTTGCTG GGTCAGATCG ATGTGCAAGA TCCTAACGAA
TGGAGCCGCA TGCTCAATAT CAATGTGATG GGCGTGCTTA ATGGCATTCA TGCGGTATTA
GCCGACATGA AAGCTCGCAA AACTGGCACT ATCATTAATG TCAGCTCAGT GGCGGGGCGT
AAAACCTTTC CAAACCACGC TGCTTACTGC GCCACTAAAT TTGCCGTGCA CGCCTTAACA
GAAAACATTC GTGAAGAAGT CGCCATGGAT GACGTACGCC TTATCACTAT CGCCCCCGGC
GCAGTAGAAA CTGAGTTGCT AAGTCATACC ACCAGCGATG ACATTAAAGC CGGTTACCAT
GACTGGAAAG AAGAAATGGG CGGCGTTATC GCGCCTGAAA ACGTCGCCGC TGCCGCACTA
TTTGCATGGC AACAACCGCA AAATGTGTGC ATACGCGAAA TCGTTTTAGC GCCAACACGC
CAACAACCTT AA
 
Protein sequence
MNQVTKSLVV ITGASSGIGA AMAKSFSAAG HPLLLLARRV EAMQALELPN SLSISVDVTD 
TAAIKTAITQ AEAQFGPVGC LINNAGVMLL GQIDVQDPNE WSRMLNINVM GVLNGIHAVL
ADMKARKTGT IINVSSVAGR KTFPNHAAYC ATKFAVHALT ENIREEVAMD DVRLITIAPG
AVETELLSHT TSDDIKAGYH DWKEEMGGVI APENVAAAAL FAWQQPQNVC IREIVLAPTR
QQP