Gene Swoo_0599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0599 
Symbol 
ID6114833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp845982 
End bp846701 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content48% 
IMG OID641632085 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001758990 
Protein GI170724964 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAC TAATCGTAAT TACAGGTGCA TCTTCTGGTA TTGGCGCTGC GATGGCCAAA 
GCATTTAGCG CTAAGGGTCA CCCTCTTCTT TTACTGGCTC GCCGTGTTGA ACCTATGCAA
GCTCTAGCAC TTGAAAATAC TCTCTGCATC AGTGTTGATG TGACCGATGG TGAAGCTATT
AAAGACGCTA TCGCAATGGC TGTTGAGCAG TTTGGTCCCG TTGGCGGATT AATCAATAAC
GCAGGTGTCA TGTTACTTGG TCAAGCCGAT ACACAAGATC CAGCCGAGTG GACACGCATG
CTTAACATCA ATGTGATGGG CGTACTCAAT GGTATTCACG CTGTACTTGC TGATATGAAA
GCACGTAAAA CAGGTACCAT TATCAACGTT AGCTCAATTG CAGGACGCAA AACCTTCCCA
AATCATGCGG CATACTGCGC AACTAAATTT GCGGTACATG CACTGACAGA AAACATCCGT
GAAGAGGTTG CTATGGATGA CGTACGTCTA ATCACTATCG CACCTGGTGC GGTAGAAACT
GAGCTACTTA GCCACACAAC TAGCGATGAA ATTAAAGCAG GTTACGCCGA CTGGAAAGAG
GAGATGGGTG GCGTTATCGC ACCAGAGACG ATTGCCGAAG CCGCACTCTT TGCCTTCGAG
CAACCACAAA GTGTCTGCGT ACGTGAAATT GTACTGGCTG CGACTCGCCA ACAGCCGTAA
 
Protein sequence
MKELIVITGA SSGIGAAMAK AFSAKGHPLL LLARRVEPMQ ALALENTLCI SVDVTDGEAI 
KDAIAMAVEQ FGPVGGLINN AGVMLLGQAD TQDPAEWTRM LNINVMGVLN GIHAVLADMK
ARKTGTIINV SSIAGRKTFP NHAAYCATKF AVHALTENIR EEVAMDDVRL ITIAPGAVET
ELLSHTTSDE IKAGYADWKE EMGGVIAPET IAEAALFAFE QPQSVCVREI VLAATRQQP