| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3507 |
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| Symbol | |
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| ID | 5453711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3752710 |
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| End bp | 3753777 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640879092 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001414763 |
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| Protein GI | 154253939 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGGA AACTCAAGCC TATTTCCGAG CAGACTATCG TGATTACGGG CGCCAGTTCA
GGAATTGGCC TGACGACGGC GCAGCGGGCG GCGCGAGCCG GTGCAAATGT GGTTCTTGTC
TCGCGGAATG AGATGGCACT GAAGAAAATC CGCGATGAAA TCCGTTCAGC GGGTGGCAAG
GCGGATTTTG TAGCCGCCGA CATGGGCGTG CGCGATGAGG TCAGGAATGT CGTCGATACG
GTCGTGGAGC GCCATGGCGG CTTCGATACA TGGGTGAACG GTGCCGGCGT CGGCATCTAC
GCACGACTGG AGGAAACATC CGACGAGGAT CACCAGAAAA TTTTCCAGAC CAATTACTGG
GGTGTCGTCT ACGGGTCCCT CGAGGCACTG AAGCACCTCA AGTACAAGCA TGGCGCCCTT
ATCAATATCG GCTCCATCAG TTCGGACATG CCCGCGCCCA TTCTCAGCGC CTACACGGCA
TCCAAGCATG CAGTGAAAGG CTTTACCGAT TCACTCCGGC TGGAATTGCT GCACGACAAG
GCGCCGGTGT CGGTTACCCT GATCAAGCCA AGTGGCATAC AGACACCGTT CGGTGATCAT
GCCAAGAACT ACATGGATGC CGCTTCGCGC GTGCCGCCGC CGGTCTATCA TCCAGAAGTC
GTGGCGGAGG CCATTCTGCG TGCTGCGACG CATCCGATGC GCGACATCAC TGTGGGTGGC
GCCGGTCTGG CGATGACGAT GCTGGCGGGC ATTGCGCCTG CTCTCTCGGA CAGGCTTTTC
GCCTGGTCTT TTTTCAAGAC GGCGCGGGAC GAAAAGCAGA AGAAGCATGA CGAATCCGCG
TTGCATGAGC CGGGAGACGG CGGGAGGAAA CTTGGCGAAC AGAGCGGCCA CATTCGCGAG
ACCAGCCTTG CCGCGAAAGC GCAAATGCAC CCTTTCGCTA CTGCGGGACT AACGGCAATC
GCTGCTGTTG CGGTGCTCTC GCTGCGCAAG AGCGGACGTC AGAGATTGGG CAACGCGACG
CGAGCCGCTA TTCCCACTCG ATTATTGATT GGCAGCATAA CGCCTTGA
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| Protein sequence | MARKLKPISE QTIVITGASS GIGLTTAQRA ARAGANVVLV SRNEMALKKI RDEIRSAGGK
ADFVAADMGV RDEVRNVVDT VVERHGGFDT WVNGAGVGIY ARLEETSDED HQKIFQTNYW
GVVYGSLEAL KHLKYKHGAL INIGSISSDM PAPILSAYTA SKHAVKGFTD SLRLELLHDK
APVSVTLIKP SGIQTPFGDH AKNYMDAASR VPPPVYHPEV VAEAILRAAT HPMRDITVGG
AGLAMTMLAG IAPALSDRLF AWSFFKTARD EKQKKHDESA LHEPGDGGRK LGEQSGHIRE
TSLAAKAQMH PFATAGLTAI AAVAVLSLRK SGRQRLGNAT RAAIPTRLLI GSITP
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