Gene Cpin_6941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6941 
Symbol 
ID8363133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8695431 
End bp8696186 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content49% 
IMG OID644969074 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003126543 
Protein GI256425890 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATAG TTCTAGTGAC CGGAGCTACC TCAGGCTTTG GTGAAGCATG CGCAAAGAAG 
TTCGCAGCGA ACGGTTATGA TGTGATTATC ACCGGAAGAA GACAGGAAAG ATTAACAGCA
TTACAACAGC AATTGCAGCA GGAACATAAG GTTGCCGTAT TGCCACTTTG TTTTGATGTG
AGAGAACAAA AGGCTGTCAG CGATATACTG GGCAACATCC CGGAACAATG GAAAGCCGTC
GATATCCTGA TCAACAATGC CGGACTCGCA CTCGGATTCA GCTCCATTGA AGACGGCGAT
CTCTCTGACT GGGATACCAT GATCGATACC AACGTAAAAG GACTCCTCTA CGTATCCAGA
GTCGTAATGC CCTGGATGAA ACAAAGACGT ACCGGACATA TCATCAACCT CGGCTCCACT
GCCGCCAAAC AGGTGTATGC CAAAGGACAC GTATACTGTG CCACCAAAGC TGCGGTAGAT
TCCATCTCCC AGGGGATGCG TATCGACCTG CTTCCTTATC GTGTCAAGGT GACAGCCGTG
CATCCGGGGG CTGCTGAAAC AGAATTTTCA GAAGTACGTT TCAAAGGAGA CAAAGACAAG
GCAGATAACG TCTATAAAGG CTTCCAGCCA TTGACAGGAC AGGATGTAGC CGATACCATC
TACTACTGCG CTACCCTGCC GCCACATGTA TGTATCAACG ATCTGGTGAT CACCTGCCTG
CAACAGGCCA ATGCTTATTA CTTCGATAAA GAGTAA
 
Protein sequence
MAIVLVTGAT SGFGEACAKK FAANGYDVII TGRRQERLTA LQQQLQQEHK VAVLPLCFDV 
REQKAVSDIL GNIPEQWKAV DILINNAGLA LGFSSIEDGD LSDWDTMIDT NVKGLLYVSR
VVMPWMKQRR TGHIINLGST AAKQVYAKGH VYCATKAAVD SISQGMRIDL LPYRVKVTAV
HPGAAETEFS EVRFKGDKDK ADNVYKGFQP LTGQDVADTI YYCATLPPHV CINDLVITCL
QQANAYYFDK E