Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6941 |
Symbol | |
ID | 8363133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8695431 |
End bp | 8696186 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644969074 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003126543 |
Protein GI | 256425890 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATAG TTCTAGTGAC CGGAGCTACC TCAGGCTTTG GTGAAGCATG CGCAAAGAAG TTCGCAGCGA ACGGTTATGA TGTGATTATC ACCGGAAGAA GACAGGAAAG ATTAACAGCA TTACAACAGC AATTGCAGCA GGAACATAAG GTTGCCGTAT TGCCACTTTG TTTTGATGTG AGAGAACAAA AGGCTGTCAG CGATATACTG GGCAACATCC CGGAACAATG GAAAGCCGTC GATATCCTGA TCAACAATGC CGGACTCGCA CTCGGATTCA GCTCCATTGA AGACGGCGAT CTCTCTGACT GGGATACCAT GATCGATACC AACGTAAAAG GACTCCTCTA CGTATCCAGA GTCGTAATGC CCTGGATGAA ACAAAGACGT ACCGGACATA TCATCAACCT CGGCTCCACT GCCGCCAAAC AGGTGTATGC CAAAGGACAC GTATACTGTG CCACCAAAGC TGCGGTAGAT TCCATCTCCC AGGGGATGCG TATCGACCTG CTTCCTTATC GTGTCAAGGT GACAGCCGTG CATCCGGGGG CTGCTGAAAC AGAATTTTCA GAAGTACGTT TCAAAGGAGA CAAAGACAAG GCAGATAACG TCTATAAAGG CTTCCAGCCA TTGACAGGAC AGGATGTAGC CGATACCATC TACTACTGCG CTACCCTGCC GCCACATGTA TGTATCAACG ATCTGGTGAT CACCTGCCTG CAACAGGCCA ATGCTTATTA CTTCGATAAA GAGTAA
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Protein sequence | MAIVLVTGAT SGFGEACAKK FAANGYDVII TGRRQERLTA LQQQLQQEHK VAVLPLCFDV REQKAVSDIL GNIPEQWKAV DILINNAGLA LGFSSIEDGD LSDWDTMIDT NVKGLLYVSR VVMPWMKQRR TGHIINLGST AAKQVYAKGH VYCATKAAVD SISQGMRIDL LPYRVKVTAV HPGAAETEFS EVRFKGDKDK ADNVYKGFQP LTGQDVADTI YYCATLPPHV CINDLVITCL QQANAYYFDK E
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