Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2064 |
Symbol | |
ID | 4185820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2413610 |
End bp | 2414404 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638072064 |
Product | oxidoreductase ( short-chain dehydrogenase) |
Protein accession | YP_678669 |
Protein GI | 110638460 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.694867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0846624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAATG AAAACCAAAC CGTACTAATT ACAGGCGCTA CCAGCGGAAT CGGACTGGAA CTCGCACGCC TGTTCGCAGC CGACAAGTAT AACATGGTAC TTGTTTCCCG CGATGAACAA AATCTAAACC GTGTTGCGGC CGAACTCCAG ACCATGGGAG CACAAAACAT AACCATAGTT CCCAAAGATC TTTCGCTGCC CAATGCTGCA GAGGATGTAT TTTTAATCAC GAAACAACAA GGTATTCATA TTAATGTACT TATAAACGAT GCAGGTGTAG GTGAATACGG GTACTTTACC GATACAAACC TGGCAAAGGA ACTGCGCATC ATCCAGCTAA ACATATCTGC CATGGTACAT CTTACTAAAC TCTATCTGCG TGAGATGATC CAGTACAATG GCGAAGGGCG TATCCTGCAA CTCGCATCTG TTGCCTCCTA CCAGCCAAGC CCGATGCTCG CGGTATATGC GGCAACAAAA GCATTTGTAC TTTCTTTCAG TGATGCACTG GCTTATGAAT TAAAAGATAC AAATATCACG ATCACGTCAT TGATCCCGAA CGCTACTGAT ACAGATTTCT TTCGGAAGGC TGGTATGGAA CATACGAAAG CAGCACAGGA TAGCCCCGAT AACCCGACAT TGGTTGCTCA GATCGGTTAT GAAGCACTTC TTAAAGGAGA ATCTCATGCG TATGCACCGG GTGTAAGACA GGCTGCTGCA ATGAGTTCAA TTCTTTCCAA TCAGAACGTT GCAAAAATGG TTGAAAAACA AATGCAGCCG GCAGAACAAA AATAA
|
Protein sequence | MTNENQTVLI TGATSGIGLE LARLFAADKY NMVLVSRDEQ NLNRVAAELQ TMGAQNITIV PKDLSLPNAA EDVFLITKQQ GIHINVLIND AGVGEYGYFT DTNLAKELRI IQLNISAMVH LTKLYLREMI QYNGEGRILQ LASVASYQPS PMLAVYAATK AFVLSFSDAL AYELKDTNIT ITSLIPNATD TDFFRKAGME HTKAAQDSPD NPTLVAQIGY EALLKGESHA YAPGVRQAAA MSSILSNQNV AKMVEKQMQP AEQK
|
| |