Gene CHU_2064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2064 
Symbol 
ID4185820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2413610 
End bp2414404 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content45% 
IMG OID638072064 
Productoxidoreductase ( short-chain dehydrogenase) 
Protein accessionYP_678669 
Protein GI110638460 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.694867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0846624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATG AAAACCAAAC CGTACTAATT ACAGGCGCTA CCAGCGGAAT CGGACTGGAA 
CTCGCACGCC TGTTCGCAGC CGACAAGTAT AACATGGTAC TTGTTTCCCG CGATGAACAA
AATCTAAACC GTGTTGCGGC CGAACTCCAG ACCATGGGAG CACAAAACAT AACCATAGTT
CCCAAAGATC TTTCGCTGCC CAATGCTGCA GAGGATGTAT TTTTAATCAC GAAACAACAA
GGTATTCATA TTAATGTACT TATAAACGAT GCAGGTGTAG GTGAATACGG GTACTTTACC
GATACAAACC TGGCAAAGGA ACTGCGCATC ATCCAGCTAA ACATATCTGC CATGGTACAT
CTTACTAAAC TCTATCTGCG TGAGATGATC CAGTACAATG GCGAAGGGCG TATCCTGCAA
CTCGCATCTG TTGCCTCCTA CCAGCCAAGC CCGATGCTCG CGGTATATGC GGCAACAAAA
GCATTTGTAC TTTCTTTCAG TGATGCACTG GCTTATGAAT TAAAAGATAC AAATATCACG
ATCACGTCAT TGATCCCGAA CGCTACTGAT ACAGATTTCT TTCGGAAGGC TGGTATGGAA
CATACGAAAG CAGCACAGGA TAGCCCCGAT AACCCGACAT TGGTTGCTCA GATCGGTTAT
GAAGCACTTC TTAAAGGAGA ATCTCATGCG TATGCACCGG GTGTAAGACA GGCTGCTGCA
ATGAGTTCAA TTCTTTCCAA TCAGAACGTT GCAAAAATGG TTGAAAAACA AATGCAGCCG
GCAGAACAAA AATAA
 
Protein sequence
MTNENQTVLI TGATSGIGLE LARLFAADKY NMVLVSRDEQ NLNRVAAELQ TMGAQNITIV 
PKDLSLPNAA EDVFLITKQQ GIHINVLIND AGVGEYGYFT DTNLAKELRI IQLNISAMVH
LTKLYLREMI QYNGEGRILQ LASVASYQPS PMLAVYAATK AFVLSFSDAL AYELKDTNIT
ITSLIPNATD TDFFRKAGME HTKAAQDSPD NPTLVAQIGY EALLKGESHA YAPGVRQAAA
MSSILSNQNV AKMVEKQMQP AEQK