Gene VEA_002433 details

Gene Information

• Locus tag: VEA_002433
• ID: 8556128
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 905913
• End bp: 906578
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 646405491
• Product: putative short-chain dehydrogenase
• Protein accession: YP_003285060
• Protein GI: 262393206
• COG category: [R] General function prediction only
• COG ID: [COG0300] Short-chain dehydrogenases of various substrate specificities

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGTAA TTACAGGTGC AAGTAGCGGT TTAGGGGCAG AGCTGGCAAA GCGTTATGAT 
GCGGAAGACA AAGAGACGTA TATCATAGGA AGAAACACAG AAAAACTATC CGCACTAGCT 
AAACAACTCT CTCATAACGT CGGCTATCAA GCTTGCAACC TCTCATTACA TCAAGATGTG 
AAACACCTAT TTGATGGGAT GAAACAGCCG CCTGAAATGG TCATTCATAG TGCAGGAAGT 
GGTTATTTTG GCGAACTGGA AGAGCAGGAG CCGGAAGAGA TTCAAAAACT GATTGATAAT 
AACCTGAATT CTGCCATTCA TGTATTAAGA GAGTTAGTAA AGCGTTACAA AGATCAACCG 
ATAAAAGTGG TCATGGTTAT GTCTACTGCT GCGCAACAGC CTAAAGCGCA AGAGTCTACG 
TATTGCGCTG TGAAGTGGGC TGTCAAAGGA TTAATCGAGT CGGTTCGTTT GGAGTTAAAA 
GGAAAGCCAA TGAAAATTAT CGCGGTTTAT CCTGGTGGAA TGGATACGGA ATTCTGGAAG 
ACAAGCGGCA ACACGATGGA CACGAGTCAC TTCATGCAAG CGGAAGATGC TGCCGAGATG 
GTCCATACGG CTTTGTCGAG CATTGGGAAT GGTTATGTTT CTGATATTAC AGTGAATAGA 
GTTTAA 

 

Protein sequence

MIVITGASSG LGAELAKRYD AEDKETYIIG RNTEKLSALA KQLSHNVGYQ ACNLSLHQDV 
KHLFDGMKQP PEMVIHSAGS GYFGELEEQE PEEIQKLIDN NLNSAIHVLR ELVKRYKDQP 
IKVVMVMSTA AQQPKAQEST YCAVKWAVKG LIESVRLELK GKPMKIIAVY PGGMDTEFWK 
TSGNTMDTSH FMQAEDAAEM VHTALSSIGN GYVSDITVNR V