| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39280 |
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| Symbol | |
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| ID | 8389249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4250745 |
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| End bp | 4251437 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644977938 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003135697 |
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| Protein GI | 257057865 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACC GACCTCTTGC TCTCGTCACA GGGGCCACCC GCGGCATCGG CGCGGCCGTG
GCCGAGGCTC TGGCGCCGAC GCACCGGTTG TTACTCGGCG GCCGGGACGC CGAGGCGCTG
CGGGAGCGGG CACAGGGGTT TCCGCAGGCG GAGGCGTGGC CCGTGGACCT CACCGACGCG
GACGCGTTGC GTGAGGCGAC CGCCTCCCTC GACACGCTGG ACGTGCTGGT GCACTCGGCC
GGGACGGCGC AATTGGGTGC GGTGGCCGAT TCGGACGCGG CGGTGTGGCG GCACAACCTG
GAGGTCAACC TCGTGGCCGT GGCCGAGTTG ACCCGGCTGG TACTGCCCGC CTTGCGTGCG
GCCAAGGGCC ATGTCGTCTT CATCAACTCC GGTCAGGGGC TGGCCGTGCG CGCCGGATGG
GGGCCGTACG CGGCGAGCAA GTTCGCCGTG CGCGCCTACG CCGACGCGTT GCGGGCGGAG
GAGGAGCCCC TGGGCGTGCG GGTCACGACG GTGTACCCGG GACGCACCGA CACCGACATG
CAACGGGCCG TCGTGGCGCA CGAGGGTGGG CAGTACGCGC CGGAGAAGTA TCTGCGTCCG
GAATCCGTGG CCGAGGCCGT GCGGGCGGCC GTGACGGCCG GGCCCGACGC ACATATGACC
GAGGTGACTA TTCGGCCACG TCCCCACCGG TAA
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| Protein sequence | MADRPLALVT GATRGIGAAV AEALAPTHRL LLGGRDAEAL RERAQGFPQA EAWPVDLTDA
DALREATASL DTLDVLVHSA GTAQLGAVAD SDAAVWRHNL EVNLVAVAEL TRLVLPALRA
AKGHVVFINS GQGLAVRAGW GPYAASKFAV RAYADALRAE EEPLGVRVTT VYPGRTDTDM
QRAVVAHEGG QYAPEKYLRP ESVAEAVRAA VTAGPDAHMT EVTIRPRPHR
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