More than 300 homologs were found in PanDaTox collection
for query gene Dd703_3945 on replicon NC_012880
Organism: Dickeya dadantii Ech703



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012880  Dd703_3945  short-chain dehydrogenase/reductase SDR  100 
 
 
264 aa  542  1e-153  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4141  short-chain dehydrogenase/reductase SDR  70.08 
 
 
264 aa  365  1e-100  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003615  oxidoreductase short-chain dehydrogenase/reductase family  51.16 
 
 
264 aa  275  7e-73  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2032  short-chain dehydrogenase/reductase SDR  53.03 
 
 
268 aa  269  2.9999999999999997e-71  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0137  short chain dehydrogenase  47.49 
 
 
265 aa  246  4e-64  Vibrio cholerae O395  Bacteria  normal  0.122699  n/a   
 
 
-
 
NC_008709  Ping_0951  short chain dehydrogenase  48.24 
 
 
268 aa  238  6.999999999999999e-62  Psychromonas ingrahamii 37  Bacteria  normal  0.333261  normal 
 
 
-
 
NC_012560  Avin_18610  short chain dehydrogenase  46.21 
 
 
263 aa  228  7e-59  Azotobacter vinelandii DJ  Bacteria  normal  0.56588  n/a   
 
 
-
 
NC_010501  PputW619_3311  short chain dehydrogenase  44.74 
 
 
268 aa  218  6e-56  Pseudomonas putida W619  Bacteria  normal  0.0701949  normal 
 
 
-
 
NC_009512  Pput_3041  short chain dehydrogenase  45.49 
 
 
268 aa  218  6e-56  Pseudomonas putida F1  Bacteria  normal  0.631041  normal 
 
 
-
 
NC_002947  PP_2711  short chain dehydrogenase  45.11 
 
 
268 aa  217  1e-55  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0649  short chain dehydrogenase  49.04 
 
 
261 aa  215  5e-55  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1938  short-chain dehydrogenase/reductase SDR  44.74 
 
 
268 aa  207  1e-52  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3021  short chain dehydrogenase  44.27 
 
 
268 aa  207  2e-52  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3831  short-chain dehydrogenase/reductase SDR  42.22 
 
 
279 aa  198  7e-50  Marinomonas sp. MWYL1  Bacteria  normal  0.9964  normal  0.26291 
 
 
-
 
NC_007492  Pfl01_3352  short chain dehydrogenase  44.05 
 
 
262 aa  195  7e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.589811  normal 
 
 
-
 
NC_008740  Maqu_0292  short chain dehydrogenase  44.44 
 
 
260 aa  177  2e-43  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03395  short-chain alcohol dehydrogenase-like protein  39.11 
 
 
281 aa  176  3e-43  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2666  short chain dehydrogenase  40.77 
 
 
265 aa  175  6e-43  Methylibium petroleiphilum PM1  Bacteria  normal  0.144956  normal 
 
 
-
 
NC_010717  PXO_02329  short chain dehydrogenase  41.75 
 
 
238 aa  158  7e-38  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0656015  n/a   
 
 
-
 
NC_010581  Bind_2585  short-chain dehydrogenase/reductase SDR  35.04 
 
 
259 aa  143  4e-33  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  40.65 
 
 
257 aa  137  2e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  32.95 
 
 
264 aa  136  3.0000000000000003e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  32.58 
 
 
264 aa  134  1.9999999999999998e-30  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  32.58 
 
 
264 aa  134  1.9999999999999998e-30  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  32.58 
 
 
264 aa  134  1.9999999999999998e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2432  short-chain dehydrogenase/reductase SDR  42.77 
 
 
250 aa  133  3e-30  Caulobacter sp. K31  Bacteria  normal  0.0883898  normal  0.373217 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  32.58 
 
 
264 aa  133  3e-30  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  32.2 
 
 
264 aa  132  5e-30  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  32.2 
 
 
264 aa  132  6.999999999999999e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  32.58 
 
 
264 aa  131  1.0000000000000001e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  31.82 
 
 
264 aa  131  1.0000000000000001e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  31.82 
 
 
264 aa  130  2.0000000000000002e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  32.7 
 
 
264 aa  125  8.000000000000001e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_4962  short-chain dehydrogenase/reductase SDR  31.89 
 
 
290 aa  120  1.9999999999999998e-26  'Nostoc azollae' 0708  Bacteria  unclonable  0.00000187582  n/a   
 
 
-
 
NC_009720  Xaut_1284  short-chain dehydrogenase/reductase SDR  36.59 
 
 
269 aa  121  1.9999999999999998e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.870899 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  34.88 
 
 
281 aa  118  9.999999999999999e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  29.92 
 
 
266 aa  115  8.999999999999998e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_009720  Xaut_0982  short-chain dehydrogenase/reductase SDR  36.46 
 
 
268 aa  114  2.0000000000000002e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0547  short-chain dehydrogenase/reductase SDR  36.1 
 
 
251 aa  112  4.0000000000000004e-24  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3253  short-chain dehydrogenase/reductase SDR  32.84 
 
 
264 aa  112  8.000000000000001e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.200417  normal  0.189117 
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  31.7 
 
 
262 aa  111  1.0000000000000001e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  35.43 
 
 
249 aa  110  3e-23  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_009720  Xaut_2977  short-chain dehydrogenase/reductase SDR  32.27 
 
 
268 aa  109  5e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.690113 
 
 
-
 
NC_009767  Rcas_3908  short-chain dehydrogenase/reductase SDR  33.73 
 
 
272 aa  108  9.000000000000001e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.106718  normal  0.186536 
 
 
-
 
NC_013161  Cyan8802_2434  short-chain dehydrogenase/reductase SDR  32.14 
 
 
274 aa  107  1e-22  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  32.11 
 
 
236 aa  108  1e-22  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_007413  Ava_2965  Short-chain dehydrogenase/reductase SDR  30.71 
 
 
293 aa  107  2e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_3439  short-chain dehydrogenase/reductase SDR  32.22 
 
 
270 aa  107  2e-22  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.349709 
 
 
-
 
NC_009656  PSPA7_4285  short chain dehydrogenase/reductase family oxidoreductase  33.48 
 
 
249 aa  106  3e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2383  short-chain dehydrogenase/reductase SDR  31.75 
 
 
274 aa  106  4e-22  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011661  Dtur_0425  short-chain dehydrogenase/reductase SDR  32.88 
 
 
241 aa  106  4e-22  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.116852  n/a   
 
 
-
 
NC_013739  Cwoe_5549  short-chain dehydrogenase/reductase SDR  32.18 
 
 
269 aa  105  5e-22  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  28.47 
 
 
286 aa  105  6e-22  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_011884  Cyan7425_3307  short-chain dehydrogenase/reductase SDR  31.89 
 
 
275 aa  105  6e-22  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  29.81 
 
 
262 aa  105  7e-22  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0451  short-chain dehydrogenase/reductase SDR  30.29 
 
 
339 aa  105  1e-21  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009565  TBFG_13074  short chain dehydrogenase  27.88 
 
 
287 aa  104  2e-21  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.486367 
 
 
-
 
NC_011004  Rpal_2058  short-chain dehydrogenase/reductase SDR  33.49 
 
 
246 aa  103  3e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3145  short-chain dehydrogenase/reductase SDR  30.23 
 
 
535 aa  102  4e-21  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.61705 
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  30.28 
 
 
260 aa  102  8e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1352  short-chain dehydrogenase/reductase SDR  33.59 
 
 
272 aa  101  1e-20  Roseiflexus sp. RS-1  Bacteria  normal  0.15703  normal 
 
 
-
 
NC_008532  STER_1192  oxidoreductase, short chain dehydrogenase/reductase family  28.9 
 
 
255 aa  101  1e-20  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1769  3-oxoacyl-(acyl-carrier-protein) reductase  36.68 
 
 
245 aa  101  1e-20  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.485655 
 
 
-
 
NC_014212  Mesil_1171  short-chain dehydrogenase/reductase SDR  34.9 
 
 
238 aa  101  2e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.399765 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  30.11 
 
 
271 aa  100  2e-20  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2060  short chain dehydrogenase  31.16 
 
 
270 aa  100  2e-20  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3104  short-chain dehydrogenase/reductase SDR  32.6 
 
 
252 aa  100  2e-20  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  35.08 
 
 
281 aa  100  3e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_007969  Pcryo_2430  short-chain dehydrogenase/reductase SDR  32.94 
 
 
274 aa  100  3e-20  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  31.72 
 
 
264 aa  99.8  4e-20  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009052  Sbal_3370  short-chain dehydrogenase/reductase SDR  33.16 
 
 
248 aa  99  7e-20  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  34.9 
 
 
238 aa  98.6  8e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  33.08 
 
 
275 aa  98.6  9e-20  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  29.92 
 
 
321 aa  98.2  1e-19  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  33.77 
 
 
238 aa  98.6  1e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_009953  Sare_3217  short-chain dehydrogenase/reductase SDR  33.48 
 
 
247 aa  98.2  1e-19  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_011683  PHATRDRAFT_38394  predicted protein  33.05 
 
 
276 aa  97.1  2e-19  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  hitchhiker  0.00142595  n/a   
 
 
-
 
NC_004116  SAG1209  short chain dehydrogenase/reductase family oxidoreductase  30.28 
 
 
253 aa  97.8  2e-19  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3027  short-chain dehydrogenase/reductase SDR  30.45 
 
 
272 aa  97.1  2e-19  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00333155 
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  29.26 
 
 
273 aa  97.1  3e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_010831  Cphamn1_0247  short-chain dehydrogenase/reductase SDR  33.51 
 
 
223 aa  97.1  3e-19  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  32.2 
 
 
273 aa  96.7  3e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1684  short-chain dehydrogenase/reductase SDR  31.53 
 
 
263 aa  96.7  3e-19  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1704  short-chain dehydrogenase/reductase SDR  30.71 
 
 
327 aa  96.3  5e-19  Methylobacterium sp. 4-46  Bacteria  normal  0.151565  normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  28.24 
 
 
261 aa  95.9  5e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013162  Coch_1233  short-chain dehydrogenase/reductase SDR  33.16 
 
 
269 aa  96.3  5e-19  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  29.15 
 
 
273 aa  96.3  5e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5627  short-chain dehydrogenase/reductase SDR  35.8 
 
 
282 aa  96.3  5e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.193827 
 
 
-
 
NC_013132  Cpin_6133  short-chain dehydrogenase/reductase SDR  30.33 
 
 
263 aa  95.9  6e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  29.51 
 
 
263 aa  95.9  6e-19  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2998  short-chain dehydrogenase/reductase SDR  33.33 
 
 
261 aa  95.9  6e-19  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  38.22 
 
 
262 aa  95.9  6e-19  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3000  short-chain dehydrogenase/reductase SDR  33.61 
 
 
241 aa  95.9  6e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  38.22 
 
 
262 aa  95.9  6e-19  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3138  short-chain dehydrogenase/reductase SDR  31.98 
 
 
246 aa  95.9  6e-19  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  34.1 
 
 
258 aa  95.5  7e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_011679  PHATR_36881  2-deoxy-D-gluconate 3-dehydrogenase  28.98 
 
 
308 aa  95.9  7e-19  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.804236  n/a   
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  35.38 
 
 
262 aa  95.5  8e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1768  3-ketoacyl-(acyl-carrier-protein) reductase NodG  35.08 
 
 
245 aa  95.5  8e-19  Chelativorans sp. BNC1  Bacteria  normal  0.323162  n/a   
 
 
-
 
NC_011692  PHATRDRAFT_5780  predicted protein  35.08 
 
 
194 aa  95.1  9e-19  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.155733  n/a   
 
 
-
 
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