More than 300 homologs were found in PanDaTox collection
for query gene Gdia_0858 on replicon NC_011365
Organism: Gluconacetobacter diazotrophicus PAl 5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011365  Gdia_0858  binding-protein-dependent transport systems inner membrane component  100 
 
 
331 aa  645    Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.124749  normal 
 
 
-
 
NC_009720  Xaut_2776  binding-protein-dependent transport systems inner membrane component  57.93 
 
 
352 aa  329  4e-89  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3868  binding-protein-dependent transport systems inner membrane component  50.88 
 
 
360 aa  322  4e-87  Variovorax paradoxus S110  Bacteria  normal  0.753162  n/a   
 
 
-
 
NC_007973  Rmet_2220  binding-protein-dependent transport systems inner membrane component  53.8 
 
 
347 aa  310  2e-83  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00146165  normal  0.277213 
 
 
-
 
NC_007951  Bxe_A2163  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  54.09 
 
 
353 aa  308  1.0000000000000001e-82  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0115  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  63.82 
 
 
352 aa  307  2.0000000000000002e-82  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4113  binding-protein-dependent transport systems inner membrane component  58.73 
 
 
365 aa  303  3.0000000000000004e-81  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.18641  n/a   
 
 
-
 
NC_008543  Bcen2424_4253  binding-protein-dependent transport systems inner membrane component  58.73 
 
 
365 aa  303  3.0000000000000004e-81  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0124034  normal  0.0867755 
 
 
-
 
NC_010515  Bcenmc03_3264  binding-protein-dependent transport systems inner membrane component  58.73 
 
 
365 aa  302  4.0000000000000003e-81  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.657095  normal 
 
 
-
 
NC_010086  Bmul_4337  binding-protein-dependent transport systems inner membrane component  57.03 
 
 
363 aa  298  8e-80  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.638266 
 
 
-
 
NC_010552  BamMC406_4150  binding-protein-dependent transport systems inner membrane component  57.94 
 
 
363 aa  298  9e-80  Burkholderia ambifaria MC40-6  Bacteria  normal  0.901317  normal  0.0679458 
 
 
-
 
NC_010581  Bind_2058  binding-protein-dependent transport systems inner membrane component  56.48 
 
 
348 aa  297  2e-79  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.911629  normal 
 
 
-
 
NC_008391  Bamb_3677  binding-protein-dependent transport systems inner membrane component  57.42 
 
 
363 aa  297  2e-79  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.959373 
 
 
-
 
NC_012857  Rpic12D_4592  binding-protein-dependent transport systems inner membrane component  54.79 
 
 
345 aa  296  3e-79  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4458  binding-protein-dependent transport systems inner membrane component  54.79 
 
 
345 aa  296  3e-79  Ralstonia pickettii 12J  Bacteria  normal  0.0470416  normal  0.49714 
 
 
-
 
NC_012560  Avin_31120  ABC transporter permease protein  60.32 
 
 
331 aa  292  6e-78  Azotobacter vinelandii DJ  Bacteria  normal  0.848336  n/a   
 
 
-
 
NC_008688  Pden_5011  binding-protein-dependent transport systems inner membrane component  56.13 
 
 
331 aa  288  7e-77  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4838  binding-protein-dependent transport systems inner membrane component  58.97 
 
 
334 aa  287  2e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1758  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  57.94 
 
 
364 aa  284  1.0000000000000001e-75  Burkholderia sp. 383  Bacteria  normal  0.351017  normal  0.0158469 
 
 
-
 
NC_011757  Mchl_1328  binding-protein-dependent transport systems inner membrane component  63.41 
 
 
332 aa  284  2.0000000000000002e-75  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.46412  normal  0.348688 
 
 
-
 
NC_010172  Mext_1168  binding-protein-dependent transport systems inner membrane component  63.01 
 
 
332 aa  283  4.0000000000000003e-75  Methylobacterium extorquens PA1  Bacteria  normal  0.811206  normal  0.0956624 
 
 
-
 
NC_010725  Mpop_4900  binding-protein-dependent transport systems inner membrane component  62.6 
 
 
333 aa  283  4.0000000000000003e-75  Methylobacterium populi BJ001  Bacteria  normal  0.572728  normal 
 
 
-
 
NC_009485  BBta_2517  putative alkanesulfonate ABC transporter, permease protein  51.3 
 
 
334 aa  281  8.000000000000001e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.562769 
 
 
-
 
NC_010322  PputGB1_3268  binding-protein-dependent transport systems inner membrane component  60.39 
 
 
331 aa  280  2e-74  Pseudomonas putida GB-1  Bacteria  normal  normal  0.478821 
 
 
-
 
NC_011004  Rpal_2687  binding-protein-dependent transport systems inner membrane component  60.47 
 
 
342 aa  277  2e-73  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2672  binding-protein-dependent transport systems inner membrane component  53.33 
 
 
346 aa  276  4e-73  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_5618  binding-protein-dependent transport systems inner membrane component  60.47 
 
 
351 aa  255  9e-67  Delftia acidovorans SPH-1  Bacteria  normal  0.447889  normal  0.316795 
 
 
-
 
NC_011004  Rpal_2903  binding-protein-dependent transport systems inner membrane component  46.67 
 
 
332 aa  245  8e-64  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2515  putative alkanesulfonate ABC transporter, permease protein  46.41 
 
 
337 aa  238  1e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.979433  normal 
 
 
-
 
NC_011830  Dhaf_1357  binding-protein-dependent transport systems inner membrane component  38.38 
 
 
338 aa  192  5e-48  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1571  binding-protein-dependent transport systems inner membrane component  36.19 
 
 
355 aa  186  3e-46  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1918  binding-protein-dependent transport systems inner membrane component  37.97 
 
 
340 aa  167  2e-40  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0527  binding-protein-dependent transport systems inner membrane component  35.89 
 
 
342 aa  164  3e-39  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0163  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
310 aa  136  6.0000000000000005e-31  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009012  Cthe_2791  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
302 aa  129  5.0000000000000004e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1812  ABC transporter, permease protein  34.31 
 
 
257 aa  115  1.0000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.554956  normal  0.627316 
 
 
-
 
NC_013159  Svir_34320  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  32.4 
 
 
273 aa  114  2.0000000000000002e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0673  binding-protein dependent transport system inner membrane protein  32.11 
 
 
275 aa  112  6e-24  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0666321  normal  0.331074 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  37.1 
 
 
260 aa  112  1.0000000000000001e-23  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_010510  Mrad2831_6154  binding-protein-dependent transport systems inner membrane component  31.86 
 
 
295 aa  110  2.0000000000000002e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  33.5 
 
 
274 aa  106  4e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  29.28 
 
 
319 aa  105  1e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  34.23 
 
 
261 aa  104  2e-21  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  35.03 
 
 
269 aa  104  3e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_013093  Amir_5422  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
269 aa  103  5e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  31.96 
 
 
305 aa  103  6e-21  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
291 aa  102  7e-21  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
291 aa  102  7e-21  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_010172  Mext_3346  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
291 aa  102  7e-21  Methylobacterium extorquens PA1  Bacteria  normal  0.252204  normal 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
274 aa  102  1e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  31.78 
 
 
277 aa  100  2e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  29.82 
 
 
306 aa  101  2e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  32.11 
 
 
271 aa  100  3e-20  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
277 aa  100  3e-20  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
258 aa  100  3e-20  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
273 aa  99.8  6e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_009943  Dole_0213  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
252 aa  99.4  9e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  29.48 
 
 
250 aa  99  1e-19  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  32.11 
 
 
273 aa  99  1e-19  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  32.11 
 
 
273 aa  99  1e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
280 aa  97.8  2e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
255 aa  97.4  3e-19  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
267 aa  97.1  4e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3671  binding-protein-dependent transport systems inner membrane component  32.29 
 
 
287 aa  96.7  6e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0347715  normal 
 
 
-
 
NC_010501  PputW619_5010  binding-protein-dependent transport systems inner membrane component  36.61 
 
 
260 aa  96.3  7e-19  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
273 aa  95.9  8e-19  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_010508  Bcenmc03_1999  binding-protein-dependent transport systems inner membrane component  33.14 
 
 
291 aa  95.9  8e-19  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2104  nitrate ABC transporter, inner membrane subunit  30.74 
 
 
283 aa  95.1  2e-18  Pseudomonas mendocina ymp  Bacteria  normal  0.0291571  normal  0.0240092 
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  30.93 
 
 
272 aa  94.4  2e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_013131  Caci_3787  binding-protein-dependent transport systems inner membrane component  30.39 
 
 
314 aa  94.7  2e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  32.41 
 
 
290 aa  93.6  4e-18  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5517  binding-protein-dependent transport systems inner membrane component  28.27 
 
 
256 aa  93.2  5e-18  Variovorax paradoxus S110  Bacteria  normal  0.16627  n/a   
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  32.37 
 
 
272 aa  93.6  5e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  28.63 
 
 
252 aa  93.2  5e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_008541  Arth_3081  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
257 aa  93.6  5e-18  Arthrobacter sp. FB24  Bacteria  normal  0.0826963  n/a   
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
288 aa  93.2  6e-18  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_010725  Mpop_4185  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
283 aa  92.8  8e-18  Methylobacterium populi BJ001  Bacteria  normal  0.321257  normal 
 
 
-
 
NC_008554  Sfum_2216  binding-protein-dependent transport systems inner membrane component  30.81 
 
 
314 aa  92.8  8e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.82677  normal  0.484673 
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  34.76 
 
 
266 aa  92  1e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_014150  Bmur_0154  binding-protein-dependent transport systems inner membrane component  27.5 
 
 
264 aa  92  1e-17  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  29.9 
 
 
282 aa  91.7  2e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_007604  Synpcc7942_2106  nitrate transport permease  32.09 
 
 
263 aa  91.3  2e-17  Synechococcus elongatus PCC 7942  Bacteria  normal  0.727969  normal 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  28.63 
 
 
273 aa  91.3  2e-17  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
269 aa  91.3  2e-17  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_012560  Avin_21990  ABC transporter, inner membrane permease component  29.51 
 
 
273 aa  90.9  2e-17  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0246  binding-protein-dependent transport systems inner membrane component  30.62 
 
 
279 aa  91.3  2e-17  Pseudomonas putida F1  Bacteria  normal  0.0570948  normal  0.0921514 
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  32.34 
 
 
285 aa  90.5  3e-17  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1818  ABC transporter, permease protein  27.64 
 
 
263 aa  90.5  4e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.493092 
 
 
-
 
NC_014150  Bmur_0153  binding-protein-dependent transport systems inner membrane component  30.73 
 
 
277 aa  90.5  4e-17  Brachyspira murdochii DSM 12563  Bacteria  normal  0.589472  n/a   
 
 
-
 
NC_010084  Bmul_1295  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
290 aa  90.5  4e-17  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0425684  normal  0.379949 
 
 
-
 
NC_009668  Oant_3592  binding-protein-dependent transport systems inner membrane component  29.73 
 
 
273 aa  90.1  5e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4981  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
279 aa  89.7  5e-17  Pseudomonas putida W619  Bacteria  normal  normal  0.588836 
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
269 aa  90.1  5e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  27.11 
 
 
283 aa  89.7  5e-17  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  32.69 
 
 
269 aa  89.7  6e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
269 aa  89.7  6e-17  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2553  binding-protein-dependent transport systems inner membrane component  28.28 
 
 
275 aa  89  9e-17  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0255  binding-protein-dependent transport systems inner membrane component  30.62 
 
 
279 aa  89.4  9e-17  Pseudomonas putida GB-1  Bacteria  normal  0.796344  normal 
 
 
-
 
NC_013165  Shel_27200  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  26.05 
 
 
253 aa  89.4  9e-17  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5130  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
272 aa  89  9e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.612608  normal  0.0470724 
 
 
-
 
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