More than 300 homologs were found in PanDaTox collection
for query gene Bcen2424_1975 on replicon NC_008542
Organism: Burkholderia cenocepacia HI2424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  100 
 
 
291 aa  572  1.0000000000000001e-162  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  100 
 
 
291 aa  572  1.0000000000000001e-162  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_010508  Bcenmc03_1999  binding-protein-dependent transport systems inner membrane component  99.66 
 
 
291 aa  570  1e-161  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1295  binding-protein-dependent transport systems inner membrane component  86.21 
 
 
290 aa  429  1e-119  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0425684  normal  0.379949 
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  66.3 
 
 
274 aa  344  8.999999999999999e-94  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  68.38 
 
 
260 aa  338  7e-92  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_010172  Mext_3346  binding-protein-dependent transport systems inner membrane component  67.69 
 
 
291 aa  328  9e-89  Methylobacterium extorquens PA1  Bacteria  normal  0.252204  normal 
 
 
-
 
NC_010501  PputW619_5010  binding-protein-dependent transport systems inner membrane component  67.19 
 
 
260 aa  318  5e-86  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4185  binding-protein-dependent transport systems inner membrane component  70.71 
 
 
283 aa  318  6e-86  Methylobacterium populi BJ001  Bacteria  normal  0.321257  normal 
 
 
-
 
NC_011757  Mchl_3671  binding-protein-dependent transport systems inner membrane component  71.98 
 
 
287 aa  315  5e-85  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0347715  normal 
 
 
-
 
NC_009485  BBta_4879  putative ABC transporter, permease protein  64.57 
 
 
263 aa  298  7e-80  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.132635 
 
 
-
 
NC_010510  Mrad2831_6154  binding-protein-dependent transport systems inner membrane component  50.61 
 
 
295 aa  238  1e-61  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  45.42 
 
 
306 aa  236  3e-61  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  47.97 
 
 
305 aa  231  1e-59  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  47.41 
 
 
319 aa  226  3e-58  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_007406  Nwi_0673  binding-protein dependent transport system inner membrane protein  49.38 
 
 
275 aa  219  3e-56  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0666321  normal  0.331074 
 
 
-
 
NC_013131  Caci_3787  binding-protein-dependent transport systems inner membrane component  43.43 
 
 
314 aa  205  9e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2216  binding-protein-dependent transport systems inner membrane component  42.8 
 
 
314 aa  204  1e-51  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.82677  normal  0.484673 
 
 
-
 
NC_008554  Sfum_2218  binding-protein-dependent transport systems inner membrane component  41.2 
 
 
290 aa  176  4e-43  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.484673 
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  45.23 
 
 
288 aa  175  9.999999999999999e-43  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  44.27 
 
 
283 aa  170  3e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0926  nitrate ABC transporter, permease protein, putative  37.36 
 
 
274 aa  170  3e-41  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0924  ABC transporter permease protein  36.8 
 
 
258 aa  169  7e-41  Methylibium petroleiphilum PM1  Bacteria  normal  0.175022  normal 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  44.55 
 
 
269 aa  166  2.9999999999999998e-40  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  40.43 
 
 
273 aa  162  8.000000000000001e-39  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  37.24 
 
 
277 aa  157  3e-37  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  42.36 
 
 
285 aa  152  4e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_010505  Mrad2831_4568  binding-protein-dependent transport systems inner membrane component  38.64 
 
 
286 aa  146  3e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  39.15 
 
 
254 aa  144  2e-33  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_011726  PCC8801_4395  nitrate ABC transporter, inner membrane subunit  30.74 
 
 
277 aa  144  2e-33  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4458  nitrate ABC transporter, inner membrane subunit  30.74 
 
 
277 aa  144  2e-33  Cyanothece sp. PCC 8802  Bacteria  normal  0.698055  normal  0.534513 
 
 
-
 
NC_011757  Mchl_1261  binding-protein-dependent transport systems inner membrane component  37.81 
 
 
293 aa  143  4e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.113651  normal 
 
 
-
 
NC_014150  Bmur_0154  binding-protein-dependent transport systems inner membrane component  31.94 
 
 
264 aa  141  9.999999999999999e-33  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  40.43 
 
 
253 aa  141  1.9999999999999998e-32  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_007778  RPB_2837  binding-protein dependent transport system inner membrane protein  39.41 
 
 
266 aa  139  4.999999999999999e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.115716  normal 
 
 
-
 
NC_007355  Mbar_A1031  sulfonate ABC transporter, permease protein  33.86 
 
 
261 aa  139  7e-32  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_013889  TK90_0666  nitrate ABC transporter, inner membrane subunit  37.37 
 
 
311 aa  137  1e-31  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0569164  decreased coverage  0.0039857 
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  39.38 
 
 
269 aa  137  2e-31  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  36.69 
 
 
264 aa  137  2e-31  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  36.69 
 
 
264 aa  137  2e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1279  binding-protein-dependent transport systems inner membrane component  39.3 
 
 
272 aa  137  3.0000000000000003e-31  Ralstonia pickettii 12D  Bacteria  normal  0.88893  normal  0.0504928 
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  36.29 
 
 
264 aa  137  3.0000000000000003e-31  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_008463  PA14_19570  ABC transporter permease  36.54 
 
 
262 aa  136  4e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6460  nitrate ABC transporter, inner membrane subunit  36.55 
 
 
297 aa  135  6.0000000000000005e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.150998 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  33.1 
 
 
290 aa  135  6.0000000000000005e-31  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1684  ABC transporter permease  36.54 
 
 
262 aa  135  7.000000000000001e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2882  binding-protein-dependent transport systems inner membrane component  36.68 
 
 
268 aa  135  7.000000000000001e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.80309  n/a   
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
255 aa  135  8e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_010682  Rpic_1216  binding-protein-dependent transport systems inner membrane component  42.86 
 
 
270 aa  135  9e-31  Ralstonia pickettii 12J  Bacteria  normal  normal  0.150226 
 
 
-
 
NC_007951  Bxe_A2492  ABC aliphatic sulfonates transporter, innermembrane subunit  37.84 
 
 
280 aa  134  9.999999999999999e-31  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.773133 
 
 
-
 
NC_010681  Bphyt_1745  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
280 aa  135  9.999999999999999e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4471  nitrate ABC transporter, inner membrane subunit  36.55 
 
 
297 aa  134  1.9999999999999998e-30  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.5689 
 
 
-
 
NC_009074  BURPS668_1822  aliphatic sulfonates ABC transporter, permease protein  40.19 
 
 
269 aa  134  1.9999999999999998e-30  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_2205  nitrate ABC transporter, inner membrane subunit  35.87 
 
 
280 aa  134  1.9999999999999998e-30  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2055  nitrate transport permease  36.71 
 
 
279 aa  134  1.9999999999999998e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.562067  normal 
 
 
-
 
NC_011004  Rpal_2953  binding-protein-dependent transport systems inner membrane component  42.63 
 
 
294 aa  133  3e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1648  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
283 aa  133  3e-30  Burkholderia phymatum STM815  Bacteria  normal  0.189471  normal  0.0804385 
 
 
-
 
NC_011884  Cyan7425_4571  nitrate ABC transporter, inner membrane subunit  36.76 
 
 
280 aa  133  3e-30  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  36.32 
 
 
271 aa  133  3.9999999999999996e-30  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_009076  BURPS1106A_1837  aliphatic sulfonates ABC transporter, permease protein  40.19 
 
 
269 aa  133  3.9999999999999996e-30  Burkholderia pseudomallei 1106a  Bacteria  normal  0.669476  n/a   
 
 
-
 
NC_009485  BBta_5414  putative nitrate ABC transporter (permease protein) (ntrB-like protein)  33.94 
 
 
279 aa  132  5e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481789  normal 
 
 
-
 
NC_012912  Dd1591_1673  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
263 aa  132  5e-30  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2500  aliphatic sulfonate ABC transporter, permease protein  39.56 
 
 
268 aa  132  5e-30  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
302 aa  132  5e-30  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_012850  Rleg_2304  binding-protein-dependent transport systems inner membrane component  35.44 
 
 
278 aa  132  6e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.37818 
 
 
-
 
NC_006348  BMA1238  aliphatic sulfonate ABC transporter, permease protein  40.19 
 
 
273 aa  132  6e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  0.466833  n/a   
 
 
-
 
NC_009080  BMA10247_0780  aliphatic sulfonate ABC transporter, permease protein  40.19 
 
 
273 aa  132  6e-30  Burkholderia mallei NCTC 10247  Bacteria  normal  0.175921  n/a   
 
 
-
 
NC_007434  BURPS1710b_1990  aliphatic sulfonates ABC transporter, permease protein  40.19 
 
 
273 aa  132  6e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  0.088895  n/a   
 
 
-
 
NC_011729  PCC7424_3526  nitrate ABC transporter, inner membrane subunit  35.6 
 
 
280 aa  132  6e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.471487 
 
 
-
 
NC_008836  BMA10229_A0381  aliphatic sulfonate ABC transporter, permease protein  40.19 
 
 
273 aa  132  6e-30  Burkholderia mallei NCTC 10229  Bacteria  normal  0.410212  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1724  aliphatic sulfonate ABC transporter, permease protein  40.19 
 
 
273 aa  132  6e-30  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2404  nitrate ABC transporter, inner membrane subunit  35.75 
 
 
279 aa  132  6.999999999999999e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.105129  n/a   
 
 
-
 
NC_009720  Xaut_1210  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
315 aa  132  6.999999999999999e-30  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5130  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
272 aa  132  7.999999999999999e-30  Methylobacterium sp. 4-46  Bacteria  normal  0.612608  normal  0.0470724 
 
 
-
 
NC_008340  Mlg_2588  nitrate ABC transporter, inner membrane subunit  35.41 
 
 
279 aa  132  7.999999999999999e-30  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  hitchhiker  0.00171927 
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  37.14 
 
 
272 aa  132  9e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_010508  Bcenmc03_1539  binding-protein-dependent transport systems inner membrane component  38.6 
 
 
270 aa  131  1.0000000000000001e-29  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0890555  normal 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
273 aa  131  1.0000000000000001e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_009135  MmarC5_0393  binding-protein-dependent transport systems inner membrane component  41.24 
 
 
253 aa  131  1.0000000000000001e-29  Methanococcus maripaludis C5  Archaea  normal  0.0876322  n/a   
 
 
-
 
NC_012917  PC1_0024  binding-protein-dependent transport systems inner membrane component  38.14 
 
 
264 aa  132  1.0000000000000001e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1083  binding-protein-dependent transport systems inner membrane component  38.6 
 
 
270 aa  131  1.0000000000000001e-29  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1563  binding-protein-dependent transport systems inner membrane component  38.6 
 
 
270 aa  131  1.0000000000000001e-29  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2618  nitrate ABC transporter, inner membrane subunit  35 
 
 
279 aa  131  1.0000000000000001e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.234813 
 
 
-
 
NC_009637  MmarC7_0444  binding-protein-dependent transport systems inner membrane component  41.24 
 
 
253 aa  131  1.0000000000000001e-29  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  36.29 
 
 
265 aa  130  2.0000000000000002e-29  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_007510  Bcep18194_A4705  nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein  36.11 
 
 
270 aa  130  2.0000000000000002e-29  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0254  binding-protein-dependent transport systems inner membrane component  36.29 
 
 
265 aa  130  2.0000000000000002e-29  Pseudomonas putida F1  Bacteria  normal  0.293544  normal  0.0445843 
 
 
-
 
NC_011988  Avi_5896  nitrate ABC transporter permease protein  32.65 
 
 
297 aa  131  2.0000000000000002e-29  Agrobacterium vitis S4  Bacteria  normal  0.149001  n/a   
 
 
-
 
NC_007948  Bpro_2935  binding-protein-dependent transport systems inner membrane component  35.68 
 
 
252 aa  130  2.0000000000000002e-29  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_1464  binding-protein-dependent transport systems inner membrane component  38.6 
 
 
270 aa  131  2.0000000000000002e-29  Burkholderia ambifaria AMMD  Bacteria  normal  0.0183453  n/a   
 
 
-
 
NC_009975  MmarC6_1476  binding-protein-dependent transport systems inner membrane component  43.64 
 
 
253 aa  131  2.0000000000000002e-29  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009720  Xaut_2503  nitrate ABC transporter, inner membrane subunit  36.27 
 
 
298 aa  130  3e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0030  binding-protein-dependent transport systems inner membrane component  37.56 
 
 
264 aa  130  3e-29  Pectobacterium wasabiae WPP163  Bacteria  normal  0.050552  n/a   
 
 
-
 
NC_011898  Ccel_0436  binding-protein-dependent transport systems inner membrane component  35.75 
 
 
255 aa  130  3e-29  Clostridium cellulolyticum H10  Bacteria  normal  0.0448966  n/a   
 
 
-
 
NC_008825  Mpe_A3486  nitrate ABC transporter permease protein  36.16 
 
 
295 aa  130  3e-29  Methylibium petroleiphilum PM1  Bacteria  normal  0.236914  normal 
 
 
-
 
NC_008541  Arth_3035  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
298 aa  130  3e-29  Arthrobacter sp. FB24  Bacteria  normal  0.30367  n/a   
 
 
-
 
NC_012791  Vapar_2975  binding-protein-dependent transport systems inner membrane component  36.2 
 
 
284 aa  129  4.0000000000000003e-29  Variovorax paradoxus S110  Bacteria  normal  0.27836  n/a   
 
 
-
 
NC_010002  Daci_4637  binding-protein-dependent transport systems inner membrane component  38.41 
 
 
283 aa  129  5.0000000000000004e-29  Delftia acidovorans SPH-1  Bacteria  normal  0.258867  hitchhiker  0.00000636426 
 
 
-
 
NC_010322  PputGB1_0263  binding-protein-dependent transport systems inner membrane component  36.29 
 
 
265 aa  129  6e-29  Pseudomonas putida GB-1  Bacteria  normal  0.791848  normal 
 
 
-
 
NC_010084  Bmul_1669  binding-protein-dependent transport systems inner membrane component  38.14 
 
 
273 aa  129  6e-29  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.5369  normal  0.169212 
 
 
-
 
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