| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1216 |
|---|
| Symbol | |
|---|
| ID | 6286170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 1305779 |
|---|
| End bp | 1306591 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642624786 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001898792 |
|---|
| Protein GI | 187928305 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.150226 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCCC AATCCAAACC GAAACCGAAG GCAAACACCT TCCTGCGTAC CGCCCGGCAA
CGATTGGCGC CGTGGATCGT GCCGCTTGTG CTGCTGGTGC TGTGGCAGGC CTCTGCCCAA
TGGGGCTGGC TGTCGAACCG CATCCTGCCG GCACCTCTGG ACGTGGCGAA ATCCGCCGTT
GCGCTGGCGC GCTCTGGCGA GCTGTGGACC CACGTGGCCG TGAGCACCTG GCGCGCGCTG
CTGGGCTTTG TAATCGGCGG CTCGCTGGGT CTGGCGCTGG GGCTGCTGAC CGGCACCTTC
CGCACAGCCG AGACGCTGCT CGACACCACG CTGCAGATGG TCCGCAACAT CCCGGTGCTG
GCGTTGATTC CGCTGGTGAT CCTGTGGTTC GGCATCGATG AATCGGCCAA GCTGTTCCTG
GTATCGCTGG GCGTGTTCTT CCCGATTTAT CTGAACACGT ATCACGGCAT CCGCTCTGTC
GACCCTGCCC TGGTGGAGAT GGCCCGCAGC TACGGCCTGT CGCGTGCGCA GTTGTATCGG
GAGGTGATCC TGCCCGGTGC GCTGCCGCAG ATCCTGGTGG GCGTGCGTTT CTCGCTCGGC
CTGATGTGGG TGACGCTGAT CGTGGCGGAG ACGGTGTCTG CGCAGGCCGG CATCGGCTAC
ATGACGATGA ATGCGCGCGA GTTCCTGCAG ACCGATGTGG TGCTGCTGGG CATCCTGCTG
TATGCGCTGC TCGGCAAGCT GGCGGATTGG TTGTCGCGCG GGCTGGAACG TTACTGGCTG
CGCTGGCACC CTGGGTATCA AGCGGCGGCC TGA
|
|---|
| Protein sequence | MASQSKPKPK ANTFLRTARQ RLAPWIVPLV LLVLWQASAQ WGWLSNRILP APLDVAKSAV
ALARSGELWT HVAVSTWRAL LGFVIGGSLG LALGLLTGTF RTAETLLDTT LQMVRNIPVL
ALIPLVILWF GIDESAKLFL VSLGVFFPIY LNTYHGIRSV DPALVEMARS YGLSRAQLYR
EVILPGALPQ ILVGVRFSLG LMWVTLIVAE TVSAQAGIGY MTMNAREFLQ TDVVLLGILL
YALLGKLADW LSRGLERYWL RWHPGYQAAA
|
|---|
| |