Gene YPK_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0423 
Symbol 
ID6091233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp462214 
End bp463008 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content53% 
IMG OID641595485 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001719179 
Protein GI170022674 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATCA GTGCACAACG AATTCTGCAT CGGCTGGCCC CTTGGATTTT GCCCGTGGCG 
TTGGTGGTTG GCTGGCAAGT CGCGGTTGAG GCGGGTTGGT TATCCAACCG CATATTACCT
GCGCCAAGTG CCGTAGTGAC CGCATTTTGG GCACTGACCA AAAGTGGTGA GCTGTGGCAA
CACCTGACTA TCAGCAGTTG GCGTGCCCTG ATTGGTTTTA GCATCGGTGG CAGCATCGGA
TTAGTGTTGG GGGTCATCAC GGGTTTGTCT CGCTGGGGAG AGCGGTTACT CAATAGCTCG
GTCCAGATGA TCCGGAATGT CCCGCATCTG GCACTGATCC CGCTGGTGAT CCTGTGGTTC
GGCATTGACG AATCCGCCAA AATTTTTCTG GTGGCACTCG GGACGTTGTT CCCTATTTAT
CTGAACACCT ATCACGGTAT TAAGAATATT GACAGTGGCC TACTGGAAAT GGCGCGCAGT
TATGGGCTGA GCGGTTTTCG ATTATTGACG CAAGTGGTGC TGCCAGGCGC GTTGCCATCG
ATCATGGTCG GTGTGCGTTT TGCGCTCGGA TTTATGTGGC TGACGCTTAT CGTGGCTGAA
ACCATTTCCG CCAATTCGGG TATTGGTTAT CTGGCAATGA ACGCCCGTGA ATTTCTCCAG
ACCGATGTGG TGGTGGTGGC CATTGTTCTG TATGCCTTAC TCGGCAAACT GGCCGATGGC
AGTGCACAAC TGCTCGAACG AGTCTGGTTG CGTTGGCATC CGGCCTATCA ACAGAAATCA
GGAGAAGCGC AATGA
 
Protein sequence
MTISAQRILH RLAPWILPVA LVVGWQVAVE AGWLSNRILP APSAVVTAFW ALTKSGELWQ 
HLTISSWRAL IGFSIGGSIG LVLGVITGLS RWGERLLNSS VQMIRNVPHL ALIPLVILWF
GIDESAKIFL VALGTLFPIY LNTYHGIKNI DSGLLEMARS YGLSGFRLLT QVVLPGALPS
IMVGVRFALG FMWLTLIVAE TISANSGIGY LAMNAREFLQ TDVVVVAIVL YALLGKLADG
SAQLLERVWL RWHPAYQQKS GEAQ