| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2404 |
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| Symbol | |
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| ID | 6410066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2593948 |
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| End bp | 2594787 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642712283 |
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| Product | nitrate ABC transporter, inner membrane subunit |
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| Protein accession | YP_001991393 |
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| Protein GI | 192290788 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.105129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAT CACTACGCCT CCGCGCCGCG GTGGTCTCGC TGCTGCTGTT CGGTGGCTTC
ATCGCCGCCT GGCATCTGGC GACGCGCGGC AGCGGCGAGG TCGCCAAGAT GAGCCCGGAA
TATGCGGCGC TGATGGGCGC CACTGCGACG CAGGGCAAAT CGGCGATGCC CGGTCCGTTC
GAGGTCGGCG CCAAGTTGTG GGAGCACATC AAGCGACCGT TCTACGACAA CGGACCCAAC
GACAAGGGGC TCGGCATTCA GCTCGGCTAT TCGATTGCGC GGGTGATGAC CGGCTATCTG
CTGGCGGTGC TCGTGGCCAT CCCGCTCGGT TTTCTGATCG GCATGTCGCC GCTGATGAAC
AAGGCGCTCG ATCCGTTCAT TCAGGTGTTG AAGCCGATCT CGCCGCTCGC CTGGATGCCG
CTTGCGCTCT ACACCATCAA GGACTCCAGC CTGTCGGCGA TCTTCGTGAT CTTCATCTGT
TCGGTGTGGC CGATGCTGCT GAACACCGCG TTCGGTGTCG CTTCGGTCCG CAAGGAGTGG
ATCAACGTCG CCCGCACGCT CGAAGTGGGC ACCGTGCGCC GCGCCTTTAC GGTGATCCTG
CCGGCCGCGG CGCCGACCAT TCTCACCGGA ATGCGGATTT CGATCGGCAT CGCCTGGCTG
GTGATCGTCG CCGCCGAGAT GCTCGTCGGC GGCACCGGCA TCGGTTACTT CGTCTGGAAC
GAATGGAATA ACCTGTCGAT CGTCAACGTG ATCATCGCGA TCTTGATGAT CGGGTTGGTC
GGCATGCTGC TCGATCAGGT GCTGGCGCGG TTCACCCATA TGGTCACGTT TCCGGAGTGA
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| Protein sequence | MTKSLRLRAA VVSLLLFGGF IAAWHLATRG SGEVAKMSPE YAALMGATAT QGKSAMPGPF
EVGAKLWEHI KRPFYDNGPN DKGLGIQLGY SIARVMTGYL LAVLVAIPLG FLIGMSPLMN
KALDPFIQVL KPISPLAWMP LALYTIKDSS LSAIFVIFIC SVWPMLLNTA FGVASVRKEW
INVARTLEVG TVRRAFTVIL PAAAPTILTG MRISIGIAWL VIVAAEMLVG GTGIGYFVWN
EWNNLSIVNV IIAILMIGLV GMLLDQVLAR FTHMVTFPE
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