Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0208 |
Symbol | |
ID | 1043748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 259888 |
End bp | 260670 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637143587 |
Product | nitrate ABC transporter, permease protein, putative |
Protein accession | NP_742377 |
Protein GI | 26986952 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.473726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCA ACCTCAAGCG CTGGCCGGTG CGCCTGGCGT CGCTGCTGGC CTGCCTGCTG TTCTGGCAAG TGGCGGCAAA CGTGAAAATG GACCTTGGTC TGCTGACGTT CACCTATGTC CCTACACCCA AGGCGGTGCT GGACGCTGCC TGGCAGTTGC TGACCTCCAG CACCCTGCTG GCGCACCTGG GCAGCAGCCT GGCGCGGGTA TTTGCCGGTT ATGCCACTGC GGCACTGGTT GGCGTGGCCC TGGGGTTGCT GATCGGCCGC TCGAAATGGG CTGAAGATAC CCTGCTGCCG CCGCTGGAAG TGCTGCGGCC GATTCCGGCT GTGGCGTGGA TCCCGCTGGC GATCCTGATG TTCCCGTCGT CGGAACTGTC GATGGTGTTC ATCACCTTCA CCGGCGCGTT GTTCCCCATC CTGCTCAACA CCGTGCATGG CGTCGAGGCC GTCGACCCGC GCTTGGTGGC ATCGGCGCGC AGCCTCGGTG CCGGGCGCTG GGCGATCCTG CGCGAGGTGG TATTGCCTGG AGCGTTGCCG AGCATCGTCA CGGGCCTTGC CATCGGCATG GGTACGTCCT GGTTCTGCCT GGTCACTGCC GAGATGATTT CCGGGCAGTT CGGCATCGGC TACTACACCT GGGAGTCCTA CACCTTGCAA AACTACCCGG ACATCGTCGT CGGCATGCTG CTGATCGGCG TGCTGGGCAT GGGCAGCAGC GCCCTGGTCA AGCGCCTGGG GGCGCTGGCC ACGCCGTGGT ACCGCACGCG GAGGGCCAGT TGA
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Protein sequence | MTRNLKRWPV RLASLLACLL FWQVAANVKM DLGLLTFTYV PTPKAVLDAA WQLLTSSTLL AHLGSSLARV FAGYATAALV GVALGLLIGR SKWAEDTLLP PLEVLRPIPA VAWIPLAILM FPSSELSMVF ITFTGALFPI LLNTVHGVEA VDPRLVASAR SLGAGRWAIL REVVLPGALP SIVTGLAIGM GTSWFCLVTA EMISGQFGIG YYTWESYTLQ NYPDIVVGML LIGVLGMGSS ALVKRLGALA TPWYRTRRAS
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