Gene PP_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0208 
Symbol 
ID1043748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp259888 
End bp260670 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID637143587 
Productnitrate ABC transporter, permease protein, putative 
Protein accessionNP_742377 
Protein GI26986952 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.473726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA ACCTCAAGCG CTGGCCGGTG CGCCTGGCGT CGCTGCTGGC CTGCCTGCTG 
TTCTGGCAAG TGGCGGCAAA CGTGAAAATG GACCTTGGTC TGCTGACGTT CACCTATGTC
CCTACACCCA AGGCGGTGCT GGACGCTGCC TGGCAGTTGC TGACCTCCAG CACCCTGCTG
GCGCACCTGG GCAGCAGCCT GGCGCGGGTA TTTGCCGGTT ATGCCACTGC GGCACTGGTT
GGCGTGGCCC TGGGGTTGCT GATCGGCCGC TCGAAATGGG CTGAAGATAC CCTGCTGCCG
CCGCTGGAAG TGCTGCGGCC GATTCCGGCT GTGGCGTGGA TCCCGCTGGC GATCCTGATG
TTCCCGTCGT CGGAACTGTC GATGGTGTTC ATCACCTTCA CCGGCGCGTT GTTCCCCATC
CTGCTCAACA CCGTGCATGG CGTCGAGGCC GTCGACCCGC GCTTGGTGGC ATCGGCGCGC
AGCCTCGGTG CCGGGCGCTG GGCGATCCTG CGCGAGGTGG TATTGCCTGG AGCGTTGCCG
AGCATCGTCA CGGGCCTTGC CATCGGCATG GGTACGTCCT GGTTCTGCCT GGTCACTGCC
GAGATGATTT CCGGGCAGTT CGGCATCGGC TACTACACCT GGGAGTCCTA CACCTTGCAA
AACTACCCGG ACATCGTCGT CGGCATGCTG CTGATCGGCG TGCTGGGCAT GGGCAGCAGC
GCCCTGGTCA AGCGCCTGGG GGCGCTGGCC ACGCCGTGGT ACCGCACGCG GAGGGCCAGT
TGA
 
Protein sequence
MTRNLKRWPV RLASLLACLL FWQVAANVKM DLGLLTFTYV PTPKAVLDAA WQLLTSSTLL 
AHLGSSLARV FAGYATAALV GVALGLLIGR SKWAEDTLLP PLEVLRPIPA VAWIPLAILM
FPSSELSMVF ITFTGALFPI LLNTVHGVEA VDPRLVASAR SLGAGRWAIL REVVLPGALP
SIVTGLAIGM GTSWFCLVTA EMISGQFGIG YYTWESYTLQ NYPDIVVGML LIGVLGMGSS
ALVKRLGALA TPWYRTRRAS